Probab=100.00 E-value=0 Score=663.80 Aligned_cols=311 Identities=36% Similarity=0.673 Sum_probs=299.4
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHCCCEECCCC
Q ss_conf 99999999999999973267775789999850688535101244225677410345542059973452320121003465
Q gi|254780834|r 116 DLIRLIEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSEEKIIEAGLLIDGDNS 195 (648)
Q Consensus 116 ~~~~~~~~~~~~~~~~l~~~~~~~a~~yl~~Rg~~~~~~~~f~lG~ap~~~~~l~~~l~~~~~~~~~~~~~gl~~~~~~~ 195 (648)
+||++++.|++|||.+|+++.+++|++||++||+++++|++|+|||||.+|+.|+++|.++|++.+.+.++||+..+++|
T Consensus 1 ~L~~i~~~a~~~y~~~L~~~~~~~a~~YL~~Rgl~~~~i~~f~lGyap~~~~~l~~~l~~~~~~~~~l~~~gl~~~~~~g 80 (314)
T d1dd9a_ 1 TLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGNPENRQSLIDAGMLVTNDQG 80 (314)
T ss_dssp CHHHHHHHHHHHHHHHHTSGGGHHHHHHHHHTTCCHHHHHHHTCEEECSSSCHHHHHHCSSHHHHHHHHHTTSEEEC---
T ss_pred CHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHEEECCCC
T ss_conf 97999999999999995898408999999977989999987452547665799999986578751566653311211444
Q ss_pred CCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCCCEECCCCCCCCCCCCHHCCCHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 41000016716888970778588850100146553001038767653521011081788886433100002356787089
Q gi|254780834|r 196 ATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFII 275 (648)
Q Consensus 196 ~~~~d~Fr~Ri~fPi~~~~g~~i~f~gR~l~~~~~~KYlNSpeT~if~K~~~Ly~l~~a~~~~~~~~~~~~~~~~~~~~i 275 (648)
. +||+|+|||||||+|.+|+|||||||++++ ..|||+|||||++|+|+++|||++.|++.|++ .+++|
T Consensus 81 ~-~~d~F~~ri~fPI~d~~g~~i~f~gR~~~~-~~~KY~ns~et~~f~k~~~ly~~~~a~~~~~~----------~~~~i 148 (314)
T d1dd9a_ 81 R-SYDRFRERVMFPIRDKRGRVIGFGGRVLGN-DTPKYLNSPETDIFHKGRQLYGLYEAQQDNAE----------PNRLL 148 (314)
T ss_dssp C-EEESCCSEEEEEEECTTSCEEEEEEEESSS-CSCSEEECCCCSSCCTTTCCBTHHHHHHTCSS----------CSCEE
T ss_pred C-CCHHCCCEEEEEEECCCCEEEEEEEEECCC-CCCCCCCCCCCCCCCCHHHCCCHHHHHHHHCC----------CCCEE
T ss_conf 3-100104406888850650389994023155-43235578763233311210219998764135----------66359
Q ss_pred EECCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCC
Q ss_conf 97143889998743554211343213662678988512681899617886622577788888877753697306752578
Q gi|254780834|r 276 LVEGYMDVLSLCQAGVQNVVSSLGTALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSR 355 (648)
Q Consensus 276 ~vEGy~Dvi~l~~~G~~n~va~~Gtalt~~~~~~l~r~~~~vvl~fDgD~AG~kAa~Ra~e~~l~~l~~g~~v~vv~LP~ 355 (648)
|||||||||+|||+||+||||+||||+|++|+++|+|++++|++|||||+||++|+.|++++++++...|.+|+|+.+|+
T Consensus 149 ivEG~~Dvi~l~q~Gi~n~Va~~Gta~t~~~~~~l~~~~~~i~l~~D~D~AG~~A~~r~~~~~~~~~~~g~~v~v~~lp~ 228 (314)
T d1dd9a_ 149 VVEGYMDVVALAQYGINYAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPD 228 (314)
T ss_dssp EESSHHHHHHHHHTTCCCEEECCC-CCCHHHHHHHHHHCSEEEEEEESSHHHHHHHHHHHHHHGGGCCTTCEEEEEEECT
T ss_pred EEECHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 99456989999970421115677640015889998741786589850675222688868988668735997289996467
Q ss_pred CCCHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88888997203668899886414992799999998530233145799999999988541799899999999999998876
Q gi|254780834|r 356 GEDPDSFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKLRYYYSQAIRDRLQQL 435 (648)
Q Consensus 356 G~DPDe~ir~~G~eaf~~ll~~A~~l~dFl~~~l~~~~dl~spe~ka~~~~~l~~~I~~I~d~~~R~~yl~~la~~L~~~ 435 (648)
|+|||||++++|+++|.+++++|.++++|+|+.+..+.++++|++++.+++++.++++.|+|+++|++|+++++++++..
T Consensus 229 g~DPDe~l~k~G~e~~~~ll~~a~~~~eFli~~~~~~~d~~s~e~k~~~~~~l~~~i~~i~d~~~r~~y~~~la~~lgis 308 (314)
T d1dd9a_ 229 GEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVPGETLRIYLRQELGNKLGIL 308 (314)
T ss_dssp TCCHHHHHHHHHHHHHHHHHTTCEEHHHHHHHHHGGGCCTTSHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
T ss_conf 67889998732799999887558989999999998558999999999999999999996899999999999999881998
Q ss_pred HHH
Q ss_conf 577
Q gi|254780834|r 436 FQK 438 (648)
Q Consensus 436 ~~~ 438 (648)
...
T Consensus 309 e~a 311 (314)
T d1dd9a_ 309 DDS 311 (314)
T ss_dssp CGG
T ss_pred HHH
T ss_conf 077
class: Multi-domain proteins (alpha and beta)
fold: DNA primase core
superfamily: DNA primase core
family: DNA primase DnaG catalytic core
domain: DNA primase DnaG catalytic core
species: Escherichia coli [TaxId: 562]