HHSEARCH alignment of GI: 254780834 and SCOP domain: d1t6t1_

Alignment
>d1t6t1_ c.136.1.1 (1:) Hypothetical protein aq_2086 {Aquifex aeolicus [TaxId: 63363]}
Probab=99.71  E-value=5e-18  Score=181.21  Aligned_cols=106  Identities=25%  Similarity=0.316  Sum_probs=93.6

Q ss_pred             CCHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHHHCCCEEEEEECCCCCCH
Q ss_conf             08178888643310000235678708997143889998743554211343213662678988512681899617886622
Q gi|254780834|r  249 YNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGTALTEYQLRLLWKLSPRIVLCFDGDDPGL  328 (648)
Q Consensus       249 y~l~~a~~~~~~~~~~~~~~~~~~~~i~vEGy~Dvi~l~~~G~~n~va~~Gtalt~~~~~~l~r~~~~vvl~fDgD~AG~  328 (648)
                      |+|..+.+.+++..        .+.+|||||||||++||++||+|+||++||++| +|+..|.+.+++||+|||+|.||+
T Consensus         2 ~~l~e~i~~l~~~~--------~~~viiVEG~~Dv~al~~~Gi~n~va~~Gt~~~-~~~~~l~~~~~~vii~~D~D~aG~   72 (108)
T d1t6t1_           2 RNLSEWIKELKKAS--------REAVILVEGKNDKKALSKFSIKNVIDLSGKRYA-DVVDMLEGKWEKVILLFDLDTHGE   72 (108)
T ss_dssp             CSHHHHHHHHHHHT--------TTSEEEESSHHHHHHHHTTTCCCEEECTTSCHH-HHHHHHTTTCSEEEECCCSSHHHH
T ss_pred             CCHHHHHHHHHHCC--------CCCEEEEECHHHHHHHHHHCCCEEEECCCCCCH-HHHHHHHHCCCEEEEEECCCHHHH
T ss_conf             67799999999747--------996899816699999998277638867987508-889999952894999968998999


Q ss_pred             HHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHCCCHHHHHH
Q ss_conf             577788888877753697306752578888889972036688998
Q gi|254780834|r  329 RAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPDSFIRCYGKTAFEK  373 (648)
Q Consensus       329 kAa~Ra~e~~l~~l~~g~~v~vv~LP~G~DPDe~ir~~G~eaf~~  373 (648)
                      +|+.|..+++.+.   |+.|       +.|||+|+++.|.+.+++
T Consensus        73 ~aa~kl~~~L~~~---g~~v-------d~~~~~~l~~~~~~~ie~  107 (108)
T d1t6t1_          73 RINQKMKELLSSQ---GFLV-------DENFRNFLKKWNIIHIEE  107 (108)
T ss_dssp             HHHHHHHHHHHHT---TCEE-------ECHHHHHHHHTTCCCGGG
T ss_pred             HHHHHHHHHHHHC---CCCC-------CCCHHHHHHHHHHHHHHC
T ss_conf             9999999999986---9977-------849999999975898853


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Toprim domain
superfamily: Toprim domain
family: Toprim domain
domain: Hypothetical protein aq 2086
species: Aquifex aeolicus [TaxId: 63363]