BLAST/PSIBLAST alignment of GI: 254780834 and GI: 190892704 at iteration 1
>gi|190892704|ref|YP_001979246.1| DNA primase [Rhizobium etli CIAT 652] Length = 666
>gi|190697983|gb|ACE92068.1| DNA primase protein [Rhizobium etli CIAT 652] Length = 666
Score = 627 bits (1617), Expect = e-177, Method: Compositional matrix adjust.
Identities = 320/662 (48%), Positives = 432/662 (65%), Gaps = 16/662 (2%)
Query: 1 MNYPRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKG 60
M + F+ ++ +PISN+I + V WD+RKTN +GDYWACCPFH EK+PSFHC D KG
Sbjct: 1 MRFSNTFLDEIRDRVPISNVIARRVSWDKRKTNVSRGDYWACCPFHGEKSPSFHCEDRKG 60
Query: 61 FYYCFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQTDLIRL 120
Y+CF C V GDH FL+ L G SF E+VQ++A +AGVP+P+ DP +EK+EK + LI +
Sbjct: 61 RYHCFGCGVTGDHFRFLTELEGLSFPEAVQQIADMAGVPMPLADPVMEKREKERGSLIDV 120
Query: 121 IEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSE 180
+E+AT FF L+ A + YL +RG+ IE F+LGYAPDSR +L+E L KG S+
Sbjct: 121 MEMATAFFQDQLQTANGAKARAYLRDRGLTGRTIETFRLGYAPDSRNALKEFLAGKGVSK 180
Query: 181 EKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETI 240
E+I GL++ +N SYDRFR+R++FPI SSR +VIAFGGR +S KYLNS ET
Sbjct: 181 EQIEACGLVVH-ENVPVSYDRFRDRIMFPILSSREKVIAFGGRAMSADAPAKYLNSNETE 239
Query: 241 LFHKGKNLYNFFGALNYLQKSIRKDVR-RNSSSFIILVEGYMDVLSLCQAGVQNVVSSLG 299
LFHKG LYNF A +Q R D + N+S II VEGYMDV++L QAGV+N V+ LG
Sbjct: 240 LFHKGNVLYNFARARRAIQGPGRGDQQDDNASGTIIAVEGYMDVIALHQAGVENAVAPLG 299
Query: 300 TALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDP 359
TALTE QL LLWK+ P+ VLCFDGD G+RAA +A +L L HL PG V F LL G+DP
Sbjct: 300 TALTENQLELLWKMVPQPVLCFDGDGAGIRAANRAAELALPHLKPGRSVRFALLPDGKDP 359
Query: 360 DSFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQK 419
D +R G+ F+K++ ++ PL +MLW RE F+TP+ RAELE LK + I D+
Sbjct: 360 DDLVRDEGRAPFDKVMSQAKPLSEMLWSREINTGKFDTPEARAELEARLKQLVAVIADEN 419
Query: 420 LRYYYSQAIRDRLQQLFQKYI-----TEHSGYGRYWKKNARHRDQKGP------SQRLMQ 468
+R +Y Q IRDRL FQ +E G+G + + + GP S RL +
Sbjct: 420 VRRHYQQDIRDRLNAFFQPQFQNRNNSERRGFGGNSRNGRDNPGKAGPKSPSLISDRLAR 479
Query: 469 SSLVKGKLSKKPSLREAALLLTLINHPAILQEQYQELADIRYDNNELQKLWS--FLFSDF 526
S V+G +LRE+ L LT++NHPA++ + Y E+A I YD+ +LQ+LWS +
Sbjct: 480 SGPVRGHRDNT-ALRESVLALTIVNHPALMIDDYDEIAAIEYDSRKLQRLWSAVLGAAAA 538
Query: 527 VEQKYFLPEEIHQRLCERGFGELLKQLDRQVRDAGLWSATTEANIVDVRQGYQQALALYK 586
V + E + +RL GFG L+K LD+QVR+A LW+AT EA + D R+GY+QALA +K
Sbjct: 539 VAGPHLTREYLTERLEFEGFGPLIKSLDQQVRNARLWTATEEAAMEDAREGYRQALAFHK 598
Query: 587 RFRLLSRQKEEIEKQIAQVTAKGEAEKTAILISILHEVHIQIHQIESQEAMIEGFGKMSG 646
R + L RQK E+E++IA T G+ E LI EVH++ ++E+QEA+I+GFG +SG
Sbjct: 599 RAKALRRQKMELEREIALATEAGDGEAIVQLIRAQQEVHLEGVRLENQEAIIDGFGVLSG 658
Query: 647 RL 648
R+
Sbjct: 659 RV 660