PSIBLAST alignment of GI: 254780834 and protein with PDB id: 3b39

>gi|165761277|pdb|3B39|A Chain A, Structure Of The Dnag Primase Catalytic Domain Bound To Ssdna Length = 322
>gi|165761278|pdb|3B39|B Chain B, Structure Of The Dnag Primase Catalytic Domain Bound To Ssdna Length = 322
 Score =  182 bits (462), Expect = 1e-43,   Method: Composition-based stats.
 Identities = 111/330 (33%), Positives = 181/330 (54%), Gaps = 12/330 (3%)

Query: 113 IQTDLIRLIEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREH 172
            +  L +L++    F+  SL+         YL++RG+    I  F +G+AP    ++ + 
Sbjct: 5   QRQTLYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKR 64

Query: 173 LRQKGFSEEKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVK 232
                 + + +I+AG+L+  ++   SYDRFR R++FPIR  RG+VI FGGR L   ++ K
Sbjct: 65  FGGNPENRQSLIDAGMLV-TNDQGRSYDRFRERVMFPIRDKRGRVIGFGGRVL-GNDTPK 122

Query: 233 YLNSPETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQ 292
           YLNSPET +FHKG+ LY  + A     +  R          +++VEGYMDV++L Q G+ 
Sbjct: 123 YLNSPETDIFHKGRQLYGLYEAQQDNAEPNR----------LLVVEGYMDVVALAQYGIN 172

Query: 293 NVVSSLGTALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVL 352
             V+SLGT+ T   ++LL++ +  ++ C+DGD  G  AA+ A++  L ++  G ++ F+ 
Sbjct: 173 YAVASLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWCALETALPYMTDGRQLRFMF 232

Query: 353 LSRGEDPDSFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCI 412
           L  GEDPD+ +R  GK AFE  + +++PL   L+         +TPD RA L       I
Sbjct: 233 LPDGEDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLI 292

Query: 413 NHIKDQKLRYYYSQAIRDRLQQLFQKYITE 442
           + +  + LR Y  Q + ++L  L    +  
Sbjct: 293 SQVPGETLRIYLRQELGNKLGILDDSQLER 322