RPSBLAST alignment for GI: 254780834 and conserved domain: COG0358

>gnl|CDD|30707 COG0358, DnaG, DNA primase (bacterial type) [DNA replication, recombination, and repair]. Length = 568
 Score =  358 bits (919), Expect = 3e-99
 Identities = 204/604 (33%), Positives = 294/604 (48%), Gaps = 53/604 (8%)

Query: 3   YPRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKGFY 62
            PR+FI +L   I I ++IG+YV     K      +Y   CPFH EKTPSF  +  KGFY
Sbjct: 2   IPREFIDELRERIDIVDVIGEYV-----KLKKQGANYTGLCPFHAEKTPSFTVSPEKGFY 56

Query: 63  YCFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQTDLIRLIE 122
           +CF C   GD + FL  LLG SF E+V +LA  AG+ LP    K  +K +    L    E
Sbjct: 57  HCFGCGAGGDAIKFLMELLGLSFDEAVLQLAGRAGIELPYEKGKRIEKRQ---KLYDGKE 113

Query: 123 VATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSEEK 182
            A  F+  SL       L  YL+ RG+ +  I  F+LGYAP +  SL   L +K + EEK
Sbjct: 114 EAAIFYQSSLDPEGAAAL-KYLETRGLAAELIAHFRLGYAPPND-SLLPFLAKKEYREEK 171

Query: 183 IIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETILF 242
           + + GLL   +     YDRFRNR++FPIR  RG VI FGGR L   +  KYLNSPET LF
Sbjct: 172 LEDLGLLKRKEG--KIYDRFRNRIMFPIRDLRGDVIGFGGRVLGDDKP-KYLNSPETELF 228

Query: 243 HKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGTAL 302
            KG+ LY    A   + K          +  II+VEGYMDV++L +AG++N V+SLGTAL
Sbjct: 229 KKGEELYGLDPARKKIAK----------ADQIIVVEGYMDVIALHKAGIKNAVASLGTAL 278

Query: 303 TEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPDSF 362
           TE  ++LL +   +++LCFDGD  G +AA +A+ LVL     G  V  +LL  G+DPD  
Sbjct: 279 TEEHIKLLSRGKKKVILCFDGDRAGRKAAKRALQLVLPLDFVG--VFVILLPDGKDPDEL 336

Query: 363 IRCYGKTAFEKLI-VESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKLR 421
           IR  G  A  K +  E LPL++ L +    +      + +A L       I  I D+ LR
Sbjct: 337 IRKEGAEALRKKLPNERLPLIEFLIEYLIPSNLDT--EGKARLVEEAVPLIKVIPDEVLR 394

Query: 422 YYYSQAIRDRLQQLFQK-YITEHSGYGRYWKKNARHRDQKGPSQRLMQSSLVKGKLSKKP 480
            YY Q + + L          +     +  +   +    +     L+Q+ ++  K     
Sbjct: 395 DYYLQKLAELLGISDDALLQLQVQPEKKATQSPFKQNPGRIAIALLVQNPVLAPKQPILK 454

Query: 481 SLREAALLLTLINHPAILQEQYQELADIRYDNNELQKLWSFLFSDFVEQKYFLPEEIHQR 540
           +L E  LL  L+    +L+       D R+ +   Q L+  L  + V             
Sbjct: 455 ALLERPLLKLLLFEELLLELFGTPEIDARFLDELFQSLFEVLLEELV------------- 501

Query: 541 LCERGFGELLKQLDRQVRDAGLWSATTEANIVDVRQGYQQALALYKRFRLLSRQKEEIEK 600
                  ELL       + A ++       I  +++   QAL    +  + +++K  + K
Sbjct: 502 -------ELLDINLLVSKAAIVFDGV----ITLLQRLLDQALEKGLKNLIGAKKKSGLNK 550

Query: 601 QIAQ 604
           +  +
Sbjct: 551 KPKE 554