RPSBLAST alignment for GI: 254780834 and conserved domain: COG0358
>gnl|CDD|30707 COG0358, DnaG, DNA primase (bacterial type) [DNA replication, recombination, and repair]. Length = 568
Score = 358 bits (919), Expect = 3e-99
Identities = 204/604 (33%), Positives = 294/604 (48%), Gaps = 53/604 (8%)
Query: 3 YPRDFIKDLLIHIPISNLIGQYVDWDRRKTNAVKGDYWACCPFHDEKTPSFHCNDSKGFY 62
PR+FI +L I I ++IG+YV K +Y CPFH EKTPSF + KGFY
Sbjct: 2 IPREFIDELRERIDIVDVIGEYV-----KLKKQGANYTGLCPFHAEKTPSFTVSPEKGFY 56
Query: 63 YCFSCHVKGDHLSFLSALLGCSFIESVQRLAAIAGVPLPVVDPKIEKKEKIQTDLIRLIE 122
+CF C GD + FL LLG SF E+V +LA AG+ LP K +K + L E
Sbjct: 57 HCFGCGAGGDAIKFLMELLGLSFDEAVLQLAGRAGIELPYEKGKRIEKRQ---KLYDGKE 113
Query: 123 VATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQKGFSEEK 182
A F+ SL L YL+ RG+ + I F+LGYAP + SL L +K + EEK
Sbjct: 114 EAAIFYQSSLDPEGAAAL-KYLETRGLAAELIAHFRLGYAPPND-SLLPFLAKKEYREEK 171
Query: 183 IIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNSPETILF 242
+ + GLL + YDRFRNR++FPIR RG VI FGGR L + KYLNSPET LF
Sbjct: 172 LEDLGLLKRKEG--KIYDRFRNRIMFPIRDLRGDVIGFGGRVLGDDKP-KYLNSPETELF 228
Query: 243 HKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVSSLGTAL 302
KG+ LY A + K + II+VEGYMDV++L +AG++N V+SLGTAL
Sbjct: 229 KKGEELYGLDPARKKIAK----------ADQIIVVEGYMDVIALHKAGIKNAVASLGTAL 278
Query: 303 TEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRGEDPDSF 362
TE ++LL + +++LCFDGD G +AA +A+ LVL G V +LL G+DPD
Sbjct: 279 TEEHIKLLSRGKKKVILCFDGDRAGRKAAKRALQLVLPLDFVG--VFVILLPDGKDPDEL 336
Query: 363 IRCYGKTAFEKLI-VESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIKDQKLR 421
IR G A K + E LPL++ L + + + +A L I I D+ LR
Sbjct: 337 IRKEGAEALRKKLPNERLPLIEFLIEYLIPSNLDT--EGKARLVEEAVPLIKVIPDEVLR 394
Query: 422 YYYSQAIRDRLQQLFQK-YITEHSGYGRYWKKNARHRDQKGPSQRLMQSSLVKGKLSKKP 480
YY Q + + L + + + + + L+Q+ ++ K
Sbjct: 395 DYYLQKLAELLGISDDALLQLQVQPEKKATQSPFKQNPGRIAIALLVQNPVLAPKQPILK 454
Query: 481 SLREAALLLTLINHPAILQEQYQELADIRYDNNELQKLWSFLFSDFVEQKYFLPEEIHQR 540
+L E LL L+ +L+ D R+ + Q L+ L + V
Sbjct: 455 ALLERPLLKLLLFEELLLELFGTPEIDARFLDELFQSLFEVLLEELV------------- 501
Query: 541 LCERGFGELLKQLDRQVRDAGLWSATTEANIVDVRQGYQQALALYKRFRLLSRQKEEIEK 600
ELL + A ++ I +++ QAL + + +++K + K
Sbjct: 502 -------ELLDINLLVSKAAIVFDGV----ITLLQRLLDQALEKGLKNLIGAKKKSGLNK 550
Query: 601 QIAQ 604
+ +
Sbjct: 551 KPKE 554