RPSBLAST alignment of GI: 254780834 and SCOP domain: d1dd9a_

Alignment

 Score =  194 bits (494), Expect = 1e-50
 Identities = 110/316 (34%), Positives = 175/316 (55%), Gaps = 12/316 (3%)

Query: 117 LIRLIEVATDFFHHSLKNARDKRLHYYLDERGIDSHAIEMFKLGYAPDSRYSLREHLRQK 176
           L +L++    F+  SL+         YL++RG+    I  F +G+AP    ++ +     
Sbjct: 2   LYQLMDGLNTFYQQSLQQPVATSARQYLEKRGLSHEVIARFAIGFAPPGWDNVLKRFGGN 61

Query: 177 GFSEEKIIEAGLLIDGDNSATSYDRFRNRLIFPIRSSRGQVIAFGGRTLSKGESVKYLNS 236
             + + +I+AG+L+  D    SYDRFR R++FPIR  RG+VI FGGR L      KYLNS
Sbjct: 62  PENRQSLIDAGMLVTNDQG-RSYDRFRERVMFPIRDKRGRVIGFGGRVLGNDT-PKYLNS 119

Query: 237 PETILFHKGKNLYNFFGALNYLQKSIRKDVRRNSSSFIILVEGYMDVLSLCQAGVQNVVS 296
           PET +FHKG+ LY  + A                 + +++VEGYMDV++L Q G+   V+
Sbjct: 120 PETDIFHKGRQLYGLYEAQQD----------NAEPNRLLVVEGYMDVVALAQYGINYAVA 169

Query: 297 SLGTALTEYQLRLLWKLSPRIVLCFDGDDPGLRAAYKAIDLVLCHLIPGNRVNFVLLSRG 356
           SLGT+ T   ++LL++ +  ++ C+DGD  G  AA++A++  L ++  G ++ F+ L  G
Sbjct: 170 SLGTSTTADHIQLLFRATNNVICCYDGDRAGRDAAWRALETALPYMTDGRQLRFMFLPDG 229

Query: 357 EDPDSFIRCYGKTAFEKLIVESLPLVDMLWKRETENRSFNTPDERAELEIHLKNCINHIK 416
           EDPD+ +R  GK AFE  + +++PL   L+         +TPD RA L       I+ + 
Sbjct: 230 EDPDTLVRKEGKEAFEARMEQAMPLSAFLFNSLMPQVDLSTPDGRARLSTLALPLISQVP 289

Query: 417 DQKLRYYYSQAIRDRL 432
            + LR Y  Q + ++L
Sbjct: 290 GETLRIYLRQELGNKL 305

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: DNA primase core
superfamily: DNA primase core
family: DNA primase DnaG catalytic core
domain: DNA primase DnaG catalytic core
species: Escherichia coli [TaxId: 562]