HHsearch alignment for GI: 254780836 and conserved domain: COG0286
>COG0286 HsdM Type I restriction-modification system methyltransferase subunit [Defense mechanisms].
Probab=100.00 E-value=0 Score=656.94 Aligned_cols=427 Identities=29% Similarity=0.467 Sum_probs=344.8
Q ss_pred HHHHHHHHHHHHHHHCCCCCHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCC
Q ss_conf 88899999999987406888343087230548999896741233999999997202468896787653389610368036
Q gi|254780836|r 8 AASLANFIWKNAEDLWGDFKHTDFGKVILPFTLLRRLECALEPTRSAVREKYLAFGGSNIDLESFVKVAGYSFYNTSEYS 87 (674)
Q Consensus 8 ~s~L~s~iW~~Ad~LRg~~~~~eY~~~ILp~~~Lrrld~~le~~k~~v~~~~~~~~~~~~~~~~~~~~~g~~F~n~s~~~ 87 (674)
T Consensus 4 ~~~l~~~lw~~ad~lr~~~~~~~yk~~il~llflk~ls~~~~~~~~~~~~~~~-------~~~~~~~~~-~-~~i~~~~~ 74 (489)
T COG0286 4 QKELSDKLWKIADILRGDIDVSGYKDYILGLLFLKYLSDKFELEFEAELEEDN-------EAKYAYPAK-G-FFIPERYR 74 (489)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHCCC-------CHHHHCCCC-C-CCCCCCCH
T ss_conf 26799999999999862167655501034002799988887899999874222-------023322222-2-25663011
Q ss_pred HHHHHHH---HHHHHHHHH---HHHHCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 8861345---589999999---9752999899987177235775444236289999874024567333761144389999
Q gi|254780836|r 88 LSTLGST---NTRNNLESY---IASFSDNAKAIFEDFDFSSTIARLEKAGLLYKICKNFSGIELHPDTVPDRVMSNIYEH 161 (674)
Q Consensus 88 ~~~l~~~---~~~~nl~~y---i~gfS~nv~dI~~~f~f~~~i~~L~~~~~L~~vI~~F~~idL~p~~v~n~~mG~iyE~ 161 (674)
T Consensus 75 ~~~~~~~~~~~~~~~l~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~d~~G~~yE~ 152 (489)
T COG0286 75 FDDLKKNAEENLGDFLDNALRKIEEKNPDLKGVFADLDFNDALKLGSLLKLLNKVILKFDEIDGR--ALDRDLFGDAYEY 152 (489)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCCC--CCCCCCCHHHHHH
T ss_conf 99999753433778999999999874344315303461122221256599999999988502122--3354421588999
Q ss_pred HHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE
Q ss_conf 99999862276657536817999999997317840110138776403117665404689999999998531005333225
Q gi|254780836|r 162 LIRRFGSEVSEGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILV 241 (674)
Q Consensus 162 LIrkFae~~~~~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~ 241 (674)
T Consensus 153 ll~~fa~~~~k~~GEfyTP~~v~~liv~~l~~----------~~~~~i~DpacGsgg~l~~a~~~~~~~~-~-----~~~ 216 (489)
T COG0286 153 LLRKFAEAEGKEAGEFYTPREVSELIVELLDP----------EPRNSIYDPACGSGGMLLQAAKYLKRHQ-D-----EIF 216 (489)
T ss_pred HHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC----------CCCCCCCCCCCCCCHHHHHHHHHHHHHC-C-----CEE
T ss_conf 99998886275578605879999999997577----------6565234733540379999999997515-5-----504
Q ss_pred EECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC----CCCEEEEEEECCCCC-CCCCCCHHHHHHHH
Q ss_conf 5046666788999999989808875334566668234754579998----664189998168567-65310001112344
Q gi|254780836|r 242 PHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLF----TGKRFHYCLSNPPFG-KKWEKDKDAVEKEH 316 (674)
Q Consensus 242 lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~----~~~kFD~vlaNPPFg-~~Wk~~~~~v~~e~ 316 (674)
T Consensus 217 ~yGqE~~~~t~~l~~mN~~lhgi~~------~~~i~~~dtl~~~~~~~~~~~~~~D~viaNPPf~~~~w~~~~~----~- 285 (489)
T COG0286 217 IYGQEINDTTYRLAKMNLILHGIEG------DANIRHGDTLSNPKHDDKDDKGKFDFVIANPPFSGKGWGGDLL----E- 285 (489)
T ss_pred EEEEECCHHHHHHHHHHHHHHCCCC------CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC----C-
T ss_conf 9989566889999996116627874------2234334423687332346655501686579955444344331----0-
Q ss_pred HCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 2266665357777477065-999999999614665788079997389713477644326899999988494688831767
Q gi|254780836|r 317 KNGELGRFGPGLPKISDGS-MLFLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLENDLIEAIVALPT 395 (674)
Q Consensus 317 ~~~~~~Rf~~glP~~sdg~-~lFlqh~i~klk~~~~~ggr~aIV~ngs~LF~G~agsGEs~IRk~lie~d~ieaII~LP~ 395 (674)
T Consensus 286 ~~~~~~~~~~g~~~~~~~~d~afi~h~~~~l~~----~g~aaivl~~gvlfr~~~---e~~IR~~l~~~~~~~~ii~lp~ 358 (489)
T COG0286 286 SEQDERFFFYGVFPTKNSADLAFLQHILYKLKP----GGRAAIVLPDGVLFRGGA---EKDIRKDLLEDNLLEAIIGLPT 358 (489)
T ss_pred CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCC----CCCEEEEECCCCCCCCCC---HHHHHHHHHHHHHHEEEEECCC
T ss_conf 024320002577888952789999999997186----770589925886627772---2579999875031335342686
Q ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCC-CCCEEEEECCCCC
Q ss_conf 765578861699999468874348838997236776576404664420698999999999972102-5410474446630
Q gi|254780836|r 396 DLFFRTNIATYLWILSNRKTEERRGKVQLINATDLWTSIRNEGKKRRIINDDQRRQILDIYVSREN-GKFSRMLDYRTFG 474 (674)
Q Consensus 396 ~lFynTgI~t~Iwil~k~K~~~rkgkV~lIDAs~~~~~~rk~G~Kr~~l~~~~i~~Iv~~y~~f~e-~e~ski~~~~~Fg 474 (674)
T Consensus 359 ~lF~~tgi~~~Il~l~k~k~~~~~-~~~fIdas~~~~--~~~~~~~~-l~~~~i~~i~~~~~~~~~~~~~~~~~~~~ei~ 434 (489)
T COG0286 359 GLFYNTGIPTNILFLTKNKPAERN-DVLFIDASKEHF--EKPLNKKR-LTEENIEKIVDTYREFKEIEGFSKSVSLEEIR 434 (489)
T ss_pred CCCCCCCCCCEEEEEECCCCCCCC-CEEEEEHHHHHH--HCCHHHHC-CCHHHHHHHHHHHHHHCCCCCHHHHCCHHHHH
T ss_conf 420357776089996158878777-569983345665--25635420-78767999999988632543221215899997
Q ss_pred EEEEEEECC
Q ss_conf 578997204
Q gi|254780836|r 475 YRRIKVLRP 483 (674)
Q Consensus 475 y~~vtverp 483 (674)
T Consensus 435 ~~~y~l~~~ 443 (489)
T COG0286 435 ENDYNLNPG 443 (489)
T ss_pred HCCCCCCCC
T ss_conf 367345754