HHsearch alignment for GI: 254780836 and conserved domain: COG2226
>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism].
Probab=96.77 E-value=0.0092 Score=37.50 Aligned_cols=138 Identities=16% Similarity=0.159 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHCC-CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 43899999999986227-66575368179999999973178401101387764031176654046899999999985310
Q gi|254780836|r 155 MSNIYEHLIRRFGSEVS-EGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSH 233 (674)
Q Consensus 155 mG~iyE~LIrkFae~~~-~~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~ 233 (674)
T Consensus 13 v~~vF~~ia~~YD~~n~~~S~g~~~~Wr~~---~i~~~----------~~~~g~~vLDva~GTGd~a~~~~k~~g----- 74 (238)
T COG2226 13 VQKVFDKVAKKYDLMNDLMSFGLHRLWRRA---LISLL----------GIKPGDKVLDVACGTGDMALLLAKSVG----- 74 (238)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCHHHHHHH---HHHHH----------CCCCCCEEEEECCCCCHHHHHHHHHCC-----
T ss_conf 999987657788754212037403999999---99860----------789998799966873199999999658-----
Q ss_pred CCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHH
Q ss_conf 05333225504666678899999998980887533456666823475457999866418999816856765310001112
Q gi|254780836|r 234 HKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVE 313 (674)
Q Consensus 234 ~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~ 313 (674)
T Consensus 75 -----~g~v~~~D~s~~ML~~a~~k~~~~~~~-------~i~fv~~dAe~LP-f~D~sFD~vt~~--fglrnv~d~~~aL 139 (238)
T COG2226 75 -----TGEVVGLDISESMLEVAREKLKKKGVQ-------NVEFVVGDAENLP-FPDNSFDAVTIS--FGLRNVTDIDKAL 139 (238)
T ss_pred -----CCEEEEEECCHHHHHHHHHHHHCCCCC-------CEEEEEECHHHCC-CCCCCCCEEEEE--EHHHCCCCHHHHH
T ss_conf -----844999979999999999874324766-------3279970565498-888765889865--1235278789999
Q ss_pred HHHH--CCCCCCCC
Q ss_conf 3442--26666535
Q gi|254780836|r 314 KEHK--NGELGRFG 325 (674)
Q Consensus 314 ~e~~--~~~~~Rf~ 325 (674)
T Consensus 140 ~E~~RVlKpgG~~~ 153 (238)
T COG2226 140 KEMYRVLKPGGRLL 153 (238)
T ss_pred HHHHHHHCCCEEEE
T ss_conf 99987626874999