HHsearch alignment for GI: 254780836 and conserved domain: PRK05134
>PRK05134 3-demethylubiquinone-9 3-methyltransferase; Provisional.
Probab=97.04 E-value=0.0068 Score=38.36 Aligned_cols=205 Identities=18% Similarity=0.166 Sum_probs=95.8
Q ss_pred HHHHHHHCC---CCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 999986227---66575368179999999973178401101387764031176654046899999999985310053332
Q gi|254780836|r 163 IRRFGSEVS---EGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPI 239 (674)
Q Consensus 163 IrkFae~~~---~~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~ 239 (674)
T Consensus 9 i~~F~~la~~WWd~~g~~~~Lh~~N~~R~~~i~~----~~--~~l~G~~ILDVGCG-gG~lse~LAr~-------G---- 70 (233)
T PRK05134 9 IAKFSALAARWWDPNGEFKPLHRINPLRLNYIRE----HA--GGLFGKRVLDVGCG-GGILSESMARL-------G---- 70 (233)
T ss_pred HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH----HC--CCCCCCEEEEECCC-CCHHHHHHHHC-------C----
T ss_conf 9999988998479999960788836999999997----51--46689989997558-97112899967-------9----
Q ss_pred EEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHH-HHHHHHH-
Q ss_conf 25504666678899999998980887533456666823475457999866418999816856765310001-1123442-
Q gi|254780836|r 240 LVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKD-AVEKEHK- 317 (674)
Q Consensus 240 ~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~-~v~~e~~- 317 (674)
T Consensus 71 a~VtGID~S~~~I~~Ar~ha~~~~l~i~--------y~~~~~e~l~~~~~~~FDvV~~~EVl--EHV~d~~~~l~~~~rl 140 (233)
T PRK05134 71 ATVTGIDASEENIEVARLHALESGLKID--------YRQITAEELAAEHPGQFDVVTCMEML--EHVPDPASFIRACAKL 140 (233)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCCE--------EEECCHHHHHHHCCCCEEEEEEEHHH--HHCCCHHHHHHHHHHH
T ss_conf 9799987998999999998564434511--------67514766543057863477442147--7538999999999997
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCC---CCCCCCCCCHHHHHHHHHHCCCEEEEEECC
Q ss_conf 26666535777747706599999999961466578807999738971---347764432689999998849468883176
Q gi|254780836|r 318 NGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLSSSP---LFNGRAGSGESEIRRWLLENDLIEAIVALP 394 (674)
Q Consensus 318 ~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ngs~---LF~G~agsGEs~IRk~lie~d~ieaII~LP 394 (674)
T Consensus 141 LKPGG~l~lsTiNrt~~S~l~~i~~AEyi---------l~~vP~gTH~w~kFi-----~P~el~~~l~~~~~~---~~~~ 203 (233)
T PRK05134 141 VKPGGLVFFSTLNRNLKSYLLAIVGAEYI---------LRMLPKGTHDYKKFI-----KPSELAAWLRQAGLE---VQDI 203 (233)
T ss_pred HCCCCEEEEECCCCCHHHHHHHHHHHHHH---------HCCCCCCCCCHHHCC-----CHHHHHHHHHHCCCE---EEEE
T ss_conf 38991499972678989999999999888---------604999985866679-----999999999987995---7210
Q ss_pred CCCCCCCCCCEEEEEEECCC
Q ss_conf 77655788616999994688
Q gi|254780836|r 395 TDLFFRTNIATYLWILSNRK 414 (674)
Q Consensus 395 ~~lFynTgI~t~Iwil~k~K 414 (674)
T Consensus 204 ~G~~ynp~--~~~w~~~~~~ 221 (233)
T PRK05134 204 KGLTYNPL--TNRWKLSDDV 221 (233)
T ss_pred EEEEEECC--CCEEEECCCC
T ss_conf 00799656--7938988999