HHsearch alignment for GI: 254780836 and conserved domain: PRK10909

Probab=97.39  E-value=0.00045  Score=46.04  Aligned_cols=99  Identities=15%  Similarity=0.153  Sum_probs=64.8

Q ss_pred             CHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf             81799999999731784011013877640311766540468999999999853100533322550466667889999999
Q gi|254780836|r  179 TPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAG  258 (674)
Q Consensus       179 TPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~n  258 (674)
T Consensus        35 T~drvREalFn~L~~----~i~---~--~~vLDLFAGSGalGlEALSR------GA-----~~v~fVE~~~~~~~~i~~N   94 (198)
T PRK10909         35 TTDRVRETLFNWLAP----VIV---D--ARCLDCFAGSGALGLEALSR------YA-----AGATLLEMDRAVSQQLIKN   94 (198)
T ss_pred             CCHHHHHHHHHHHHH----HCC---C--CEEEECCCCCCHHHHHHHHC------CC-----CEEEEEECCHHHHHHHHHH
T ss_conf             838899999987576----429---9--87998277746889999987------99-----7899997899999999999


Q ss_pred             HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf             8980887533456666823475457999866418999816856765
Q gi|254780836|r  259 MLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKK  304 (674)
Q Consensus       259 Mli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~  304 (674)
T Consensus        95 ~~~l~~~-------~~~ii~~da~~~L~~~~~~fDlIF~DPPY~~~  133 (198)
T PRK10909         95 LATLKAG-------NARVVNTNALSFLAQPGTPHNVVFVDPPFRKG  133 (198)
T ss_pred             HHHHCCC-------CEEEEEHHHHHHHHCCCCCEEEEEECCCCCCC
T ss_conf             9984888-------67999556999862559952189989997655