HHsearch results for GI: 254780836 and protein with PDBid: 1ve3_A
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.40 E-value=0.0024 Score=39.92 Aligned_cols=103 Identities=15% Similarity=0.183 Sum_probs=65.9
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 03117665404689999999998531005333225504666678899999998980887533456666823475457999
Q gi|254780836|r 207 RTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDL 286 (674)
Q Consensus 207 ~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~ 286 (674)
.+|+|-.||||.+.....++ ...+.|.|+++...+.|+....-++.+. ....||-.. =.
T Consensus 40 ~rVLDiGCG~G~~~~~la~~------------~~~v~g~D~s~~~l~~ak~~~~~~~~~~--------~~~~~d~~~-l~ 98 (227)
T 1ve3_A 40 GKVLDLACGVGGFSFLLEDY------------GFEVVGVDISEDMIRKAREYAKSRESNV--------EFIVGDARK-LS 98 (227)
T ss_dssp CEEEEETCTTSHHHHHHHHT------------TCEEEEEESCHHHHHHHHHHHHHTTCCC--------EEEECCTTS-CC
T ss_pred CEEEEECCCCCHHHHHHHHC------------CCEEEEEECCCHHHHHHHHHHHHCCCCC--------CCCCCCCCC-CC
T ss_conf 97999868888999999965------------9989999675046899999887527653--------333465334-88
Q ss_pred CCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 86641899981685676531000111234422666653577774770659999999996146657880799973
Q gi|254780836|r 287 FTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVL 360 (674)
Q Consensus 287 ~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ 360 (674)
+++..||+|+++=-| .| +|+. | .-.++..+...|+| ||+.++..
T Consensus 99 ~~~~sfD~V~~~~~l--~~----------------------~~~~-d-~~~~l~~~~r~Lkp----gG~lii~~ 142 (227)
T 1ve3_A 99 FEDKTFDYVIFIDSI--VH----------------------FEPL-E-LNQVFKEVRRVLKP----SGKFIMYF 142 (227)
T ss_dssp SCTTCEEEEEEESCG--GG----------------------CCHH-H-HHHHHHHHHHHEEE----EEEEEEEE
T ss_pred CCCCEEEEEEEEHHH--HH----------------------CCHH-H-HHHHHHHHHHHCCC----CCEEEEEE
T ss_conf 767705899860017--72----------------------9876-8-99999999998380----85899997