HHsearch results for GI: 254780836 and protein with PDBid: 1ws6_A
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus HB8} SCOP: c.66.1.46
Probab=98.51 E-value=7.7e-08 Score=69.20 Aligned_cols=100 Identities=17% Similarity=0.196 Sum_probs=64.3
Q ss_pred CCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHH
Q ss_conf 36817999999997317840110138776403117665404689999999998531005333225504666678899999
Q gi|254780836|r 177 FMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCV 256 (674)
Q Consensus 177 ffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak 256 (674)
-.||--|-..+-+++.. .+ .+ ..+|.|++||||++-++|... +. .+.+.|+++....+|+
T Consensus 21 Rpt~~~vre~~f~~l~~----~~--~~--~~~vLDl~~G~G~~~i~a~~~--------ga----~vv~vD~~~~ai~~~~ 80 (171)
T 1ws6_A 21 RPSPVRLRKALFDYLRL----RY--PR--RGRFLDPFAGSGAVGLEAASE--------GW----EAVLVEKDPEAVRLLK 80 (171)
T ss_dssp CCCCHHHHHHHHHHHHH----HC--TT--CCEEEEETCSSCHHHHHHHHT--------TC----EEEEECCCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHC----CC--CC--CCEEEECCCCHHHHHHHHHHC--------CC----CCCCEECCHHHHHHHH
T ss_conf 96748999999999736----45--79--798999620678999999980--------89----5300606878999999
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCC---CCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 9989808875334566668234754---57999866418999816856765
Q gi|254780836|r 257 AGMLIRRLESDPRRDLSKNIQQGST---LSKDLFTGKRFHYCLSNPPFGKK 304 (674)
Q Consensus 257 ~nMli~g~~~d~~~~~~~NI~~GdT---L~~d~~~~~kFD~vlaNPPFg~~ 304 (674)
.|+-..|.+.. +..++. +......+.+||+|++||||+.+
T Consensus 81 ~N~~~~g~~~~--------v~~~~~d~~~~~~~~~~~~fDlI~~DPPY~~~ 123 (171)
T 1ws6_A 81 ENVRRTGLGAR--------VVALPVEVFLPEAKAQGERFTVAFMAPPYAMD 123 (171)
T ss_dssp HHHHHHTCCCE--------EECSCHHHHHHHHHHTTCCEEEEEECCCTTSC
T ss_pred HHHHHCCCCCE--------EEEEEHHHHHHHHHHCCCCEEEEEECCCCCCC
T ss_conf 87886066555--------99977898755555338855799987998867