HHsearch results for GI: 254780836 and protein with PDBid: 1y8c_A
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.50A {Clostridium acetobutylicum atcc 824} SCOP: c.66.1.43
Probab=96.75 E-value=0.0046 Score=38.05 Aligned_cols=121 Identities=12% Similarity=0.157 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf 79999999973178401101387764031176654046899999999985310053332255046666788999999989
Q gi|254780836|r 181 RDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGML 260 (674)
Q Consensus 181 R~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMl 260 (674)
...+..+.+++- .......+|+|.+||||.++... .+ .+ ..+.|.|+++.+-++|+...-
T Consensus 21 ~~~~~~~~~~~~--------~~~~~~~~iLDlGCGtG~~~~~l----~~----~g----~~v~gvD~S~~ml~~a~~~~~ 80 (246)
T 1y8c_A 21 KKWSDFIIEKCV--------ENNLVFDDYLDLACGTGNLTENL----CP----KF----KNTWAVDLSQEMLSEAENKFR 80 (246)
T ss_dssp HHHHHHHHHHHH--------TTTCCTTEEEEETCTTSTTHHHH----GG----GS----SEEEEECSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--------HHCCCCCEEEEEECCCCHHHHHH----HH----CC----CEEEEEECCHHHHHHHHHHCC
T ss_conf 999999999999--------73899892999807462999999----97----49----959999674999998763112
Q ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC-CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 80887533456666823475457999866418999816-85676531000111234422666653577774770659999
Q gi|254780836|r 261 IRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSN-PPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFL 339 (674)
Q Consensus 261 i~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaN-PPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFl 339 (674)
-.+.+. ....||-..-+ ...+||+|++- -.|+. ++...+ -..++
T Consensus 81 ~~~~~~--------~~~~~d~~~~~--~~~~fD~V~~~~~~~~~------------------------~~~~~~-~~~~l 125 (246)
T 1y8c_A 81 SQGLKP--------RLACQDISNLN--INRKFDLITCCLDSTNY------------------------IIDSDD-LKKYF 125 (246)
T ss_dssp HTTCCC--------EEECCCGGGCC--CSCCEEEEEECTTGGGG------------------------CCSHHH-HHHHH
T ss_pred CCCCCC--------CCCCCCHHHHH--CCCCCCCCCEEEEEEEC------------------------CCCHHH-HHHHH
T ss_conf 234432--------22346677751--03341224121022213------------------------688789-99999
Q ss_pred HHHHHHHCCCCCCCCEEEEEC
Q ss_conf 999996146657880799973
Q gi|254780836|r 340 MHLANKLELPPNGGGRAAIVL 360 (674)
Q Consensus 340 qh~i~klk~~~~~ggr~aIV~ 360 (674)
+++-..|+| ||+..+-+
T Consensus 126 ~~i~~~Lkp----gG~li~~~ 142 (246)
T 1y8c_A 126 KAVSNHLKE----GGVFIFDI 142 (246)
T ss_dssp HHHHTTEEE----EEEEEEEE
T ss_pred HHHHHHCCC----CEEEEEEE
T ss_conf 999997499----80999994