HHsearch results for GI: 254780836 and protein with PDBid: 1y8c_A

>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI, nysgxrc; 2.50A {Clostridium acetobutylicum atcc 824} SCOP: c.66.1.43
Probab=96.75  E-value=0.0046  Score=38.05  Aligned_cols=121  Identities=12%  Similarity=0.157  Sum_probs=68.8

Q ss_pred             HHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHH
Q ss_conf             79999999973178401101387764031176654046899999999985310053332255046666788999999989
Q gi|254780836|r  181 RDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGML  260 (674)
Q Consensus       181 R~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMl  260 (674)
                      ...+..+.+++-        .......+|+|.+||||.++...    .+    .+    ..+.|.|+++.+-++|+...-
T Consensus        21 ~~~~~~~~~~~~--------~~~~~~~~iLDlGCGtG~~~~~l----~~----~g----~~v~gvD~S~~ml~~a~~~~~   80 (246)
T 1y8c_A           21 KKWSDFIIEKCV--------ENNLVFDDYLDLACGTGNLTENL----CP----KF----KNTWAVDLSQEMLSEAENKFR   80 (246)
T ss_dssp             HHHHHHHHHHHH--------TTTCCTTEEEEETCTTSTTHHHH----GG----GS----SEEEEECSCHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHH--------HHCCCCCEEEEEECCCCHHHHHH----HH----CC----CEEEEEECCHHHHHHHHHHCC
T ss_conf             999999999999--------73899892999807462999999----97----49----959999674999998763112


Q ss_pred             HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC-CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             80887533456666823475457999866418999816-85676531000111234422666653577774770659999
Q gi|254780836|r  261 IRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSN-PPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFL  339 (674)
Q Consensus       261 i~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaN-PPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFl  339 (674)
                      -.+.+.        ....||-..-+  ...+||+|++- -.|+.                        ++...+ -..++
T Consensus        81 ~~~~~~--------~~~~~d~~~~~--~~~~fD~V~~~~~~~~~------------------------~~~~~~-~~~~l  125 (246)
T 1y8c_A           81 SQGLKP--------RLACQDISNLN--INRKFDLITCCLDSTNY------------------------IIDSDD-LKKYF  125 (246)
T ss_dssp             HTTCCC--------EEECCCGGGCC--CSCCEEEEEECTTGGGG------------------------CCSHHH-HHHHH
T ss_pred             CCCCCC--------CCCCCCHHHHH--CCCCCCCCCEEEEEEEC------------------------CCCHHH-HHHHH
T ss_conf             234432--------22346677751--03341224121022213------------------------688789-99999


Q ss_pred             HHHHHHHCCCCCCCCEEEEEC
Q ss_conf             999996146657880799973
Q gi|254780836|r  340 MHLANKLELPPNGGGRAAIVL  360 (674)
Q Consensus       340 qh~i~klk~~~~~ggr~aIV~  360 (674)
                      +++-..|+|    ||+..+-+
T Consensus       126 ~~i~~~Lkp----gG~li~~~  142 (246)
T 1y8c_A          126 KAVSNHLKE----GGVFIFDI  142 (246)
T ss_dssp             HHHHTTEEE----EEEEEEEE
T ss_pred             HHHHHHCCC----CEEEEEEE
T ss_conf             999997499----80999994