HHsearch results for GI: 254780836 and protein with PDBid: 2ar0_A
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45
Probab=100.00 E-value=0 Score=630.72 Aligned_cols=390 Identities=21% Similarity=0.335 Sum_probs=312.3
Q ss_pred CCCCHHHHHHHHHHHHHHHC-CCCCHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC
Q ss_conf 10178889999999998740-68883430872305489998967412339999999972024688967876533896103
Q gi|254780836|r 4 FTGSAASLANFIWKNAEDLW-GDFKHTDFGKVILPFTLLRRLECALEPTRSAVREKYLAFGGSNIDLESFVKVAGYSFYN 82 (674)
Q Consensus 4 ~~~t~s~L~s~iW~~Ad~LR-g~~~~~eY~~~ILp~~~Lrrld~~le~~k~~v~~~~~~~~~~~~~~~~~~~~~g~~F~n 82 (674)
|+-+.++|+++||++||+|| |.+++++|+++|++|+||||+|+..++. +|.
T Consensus 1 m~~~~~~l~~klw~~ad~lR~ggi~~~~y~~~i~~llFlK~~~e~~~e~----------------------------~~i 52 (541)
T 2ar0_A 1 MSLNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEA----------------------------EYL 52 (541)
T ss_dssp -----CHHHHHHHHHHHHHHTTTCCTTSHHHHHHHHHHHHHHHHHTCHH----------------------------HHS
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHCCCCH----------------------------HHC
T ss_conf 9986899999999999998669999899999999999987320152846----------------------------447
Q ss_pred CCCCCHHHHHH---HHHHHHHHHHHHHH----CHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCC--CCCCCH
Q ss_conf 68036886134---55899999999752----9998999871772357754442362899998740245673--337611
Q gi|254780836|r 83 TSEYSLSTLGS---TNTRNNLESYIASF----SDNAKAIFEDFDFSSTIARLEKAGLLYKICKNFSGIELHP--DTVPDR 153 (674)
Q Consensus 83 ~s~~~~~~l~~---~~~~~nl~~yi~gf----S~nv~dI~~~f~f~~~i~~L~~~~~L~~vI~~F~~idL~p--~~v~n~ 153 (674)
+..+.|..|.. +.....+...+..+ +.-+++||.++.+ ++.+...|..||+.|..+++.+ ...+.+
T Consensus 53 pe~~~w~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~if~~~~~-----~~~~~~~l~~lv~~i~~~~~~~~~~~~~~D 127 (541)
T 2ar0_A 53 PEGYRWDDLKSRIGQEQLQFYRKMLVHLGEDDKKLVQAVFHNVST-----TITEPKQITALVSNMDSLDWYNGAHGKSRD 127 (541)
T ss_dssp CTTSSHHHHHTCCHHHHHHHHHHHHHHHTSSSCHHHHHHHTTCCC-----CCCCHHHHHHHHHHHHTCCC----------
T ss_pred CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf 865878999852383789999999999987647889775242443-----236858999999865432555432455600
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 44389999999998622766575368179999999973178401101387764031176654046899999999985310
Q gi|254780836|r 154 VMSNIYEHLIRRFGSEVSEGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSH 233 (674)
Q Consensus 154 ~mG~iyE~LIrkFae~~~~~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~ 233 (674)
.||++||+||++|++..++++|||||||+||++||+++ .|....+||||||||||||++|.+|+.+....
T Consensus 128 ~~G~~YE~ll~~~a~~~~k~~GqffTP~~Iv~~mv~ll----------~p~~~~~I~DPacGsG~fL~~a~~~l~~~~~~ 197 (541)
T 2ar0_A 128 DFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLL----------KPQPREVVQDPAAGTAGFLIEADRYVKSQTND 197 (541)
T ss_dssp ----------------------CCCCCHHHHHHHHHHH----------CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTT
T ss_pred HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH----------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 77999999999998761775875679899999999862----------89988730465778560579999999984366
Q ss_pred CCCC--------CCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf 0533--------32255046666788999999989808875334566668234754579998664189998168567653
Q gi|254780836|r 234 HKIP--------PILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKW 305 (674)
Q Consensus 234 ~~~~--------~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~W 305 (674)
.... ....+||||+++.+|+||+|||++||++.+.. ...++..+++|..|.....+||+||+|||||..|
T Consensus 198 ~~~~~~~~~~~~~~~~~~G~E~~~~~~~la~~nl~l~g~~~~~~--~~~~~~~~~~l~~d~~~~~~fD~Vl~NPPfg~~~ 275 (541)
T 2ar0_A 198 LDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLD--HGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAA 275 (541)
T ss_dssp TTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGG--GTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCS
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC--CCCCHHCCCCHHHCCCCCCCCCEEEECCCCCCCC
T ss_conf 21110467888887666302066999999986466345630113--4750210450433044443466687369976644
Q ss_pred CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf 10001112344226666535777747706599999999961466578807999738971347764432689999998849
Q gi|254780836|r 306 EKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLEND 385 (674)
Q Consensus 306 k~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ngs~LF~G~agsGEs~IRk~lie~d 385 (674)
..+ ++..+.|+.++++++||||++++|++ |||+|+|+|.|+||+|++ ++.||++|++++
T Consensus 276 ~~~--------------~~~~~~~~~~~~~~~Fi~~~l~~Lk~----~Gr~aiIlP~~~Lf~~~~---~~~iR~~Lle~~ 334 (541)
T 2ar0_A 276 GTN--------------ITRTFVHPTSNKQLCFMQHIIETLHP----GGRAAVVVPDNVLFEGGK---GTDIRRDLMDKC 334 (541)
T ss_dssp SCC--------------CCSCCSSCCSCHHHHHHHHHHHHEEE----EEEEEEEEEHHHHHCCTH---HHHHHHHHHHHE
T ss_pred CCC--------------CCCCCCCCCCCHHHHHHHHHHHHCCC----CCEEEEEECCCHHHCCHH---HHHHHHHHHHCC
T ss_conf 434--------------30002576552779999999997378----976999956820101000---079999998629
Q ss_pred CEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC------CCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 468883176776557886169999946887434------88389972367765764046644206989999999999721
Q gi|254780836|r 386 LIEAIVALPTDLFFRTNIATYLWILSNRKTEER------RGKVQLINATDLWTSIRNEGKKRRIINDDQRRQILDIYVSR 459 (674)
Q Consensus 386 ~ieaII~LP~~lFynTgI~t~Iwil~k~K~~~r------kgkV~lIDAs~~~~~~rk~G~Kr~~l~~~~i~~Iv~~y~~f 459 (674)
.|+|||.||+++||+|||+||||||+|+|+..+ +++|+||||+..+.+ +.|||+|+++||++|+++|..+
T Consensus 335 ~l~aII~LP~~~F~~t~v~t~Il~l~K~k~~~~~~~~~~~~~v~f~d~~~~~~~----~~k~~~l~~e~i~~i~~~y~~~ 410 (541)
T 2ar0_A 335 HLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPS----FGKRTPFTDEHLQPFERVYGED 410 (541)
T ss_dssp EEEEEEECCSSCSSSCSCCEEEEEEEEBCSSCTTCCSCCCCEEEEEECSTTCCC----CSSSSCCCGGGTHHHHHHHCSC
T ss_pred EEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEHHHCCCC----CCCCCCCCHHHHHHHHHHHHHC
T ss_conf 189999787044789999769999989987765444577660799984321876----6698849999999999997213
Q ss_pred CCCC
Q ss_conf 0254
Q gi|254780836|r 460 ENGK 463 (674)
Q Consensus 460 ~e~e 463 (674)
.++.
T Consensus 411 ~~~~ 414 (541)
T 2ar0_A 411 PHGL 414 (541)
T ss_dssp TTSC
T ss_pred CCCC
T ss_conf 2234