HHsearch results for GI: 254780836 and protein with PDBid: 2ar0_A

>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45
Probab=100.00  E-value=0  Score=630.72  Aligned_cols=390  Identities=21%  Similarity=0.335  Sum_probs=312.3

Q ss_pred             CCCCHHHHHHHHHHHHHHHC-CCCCHHHCCCEEEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCC
Q ss_conf             10178889999999998740-68883430872305489998967412339999999972024688967876533896103
Q gi|254780836|r    4 FTGSAASLANFIWKNAEDLW-GDFKHTDFGKVILPFTLLRRLECALEPTRSAVREKYLAFGGSNIDLESFVKVAGYSFYN   82 (674)
Q Consensus         4 ~~~t~s~L~s~iW~~Ad~LR-g~~~~~eY~~~ILp~~~Lrrld~~le~~k~~v~~~~~~~~~~~~~~~~~~~~~g~~F~n   82 (674)
                      |+-+.++|+++||++||+|| |.+++++|+++|++|+||||+|+..++.                            +|.
T Consensus         1 m~~~~~~l~~klw~~ad~lR~ggi~~~~y~~~i~~llFlK~~~e~~~e~----------------------------~~i   52 (541)
T 2ar0_A            1 MSLNNNDLVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQEA----------------------------EYL   52 (541)
T ss_dssp             -----CHHHHHHHHHHHHHHTTTCCTTSHHHHHHHHHHHHHHHHHTCHH----------------------------HHS
T ss_pred             CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCHHCCCCH----------------------------HHC
T ss_conf             9986899999999999998669999899999999999987320152846----------------------------447


Q ss_pred             CCCCCHHHHHH---HHHHHHHHHHHHHH----CHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCCCC--CCCCCH
Q ss_conf             68036886134---55899999999752----9998999871772357754442362899998740245673--337611
Q gi|254780836|r   83 TSEYSLSTLGS---TNTRNNLESYIASF----SDNAKAIFEDFDFSSTIARLEKAGLLYKICKNFSGIELHP--DTVPDR  153 (674)
Q Consensus        83 ~s~~~~~~l~~---~~~~~nl~~yi~gf----S~nv~dI~~~f~f~~~i~~L~~~~~L~~vI~~F~~idL~p--~~v~n~  153 (674)
                      +..+.|..|..   +.....+...+..+    +.-+++||.++.+     ++.+...|..||+.|..+++.+  ...+.+
T Consensus        53 pe~~~w~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~~~if~~~~~-----~~~~~~~l~~lv~~i~~~~~~~~~~~~~~D  127 (541)
T 2ar0_A           53 PEGYRWDDLKSRIGQEQLQFYRKMLVHLGEDDKKLVQAVFHNVST-----TITEPKQITALVSNMDSLDWYNGAHGKSRD  127 (541)
T ss_dssp             CTTSSHHHHHTCCHHHHHHHHHHHHHHHTSSSCHHHHHHHTTCCC-----CCCCHHHHHHHHHHHHTCCC----------
T ss_pred             CCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----CCCCHHHHHHHHHHHHHCCCCCCCCCCCCH
T ss_conf             865878999852383789999999999987647889775242443-----236858999999865432555432455600


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             44389999999998622766575368179999999973178401101387764031176654046899999999985310
Q gi|254780836|r  154 VMSNIYEHLIRRFGSEVSEGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSH  233 (674)
Q Consensus       154 ~mG~iyE~LIrkFae~~~~~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~  233 (674)
                      .||++||+||++|++..++++|||||||+||++||+++          .|....+||||||||||||++|.+|+.+....
T Consensus       128 ~~G~~YE~ll~~~a~~~~k~~GqffTP~~Iv~~mv~ll----------~p~~~~~I~DPacGsG~fL~~a~~~l~~~~~~  197 (541)
T 2ar0_A          128 DFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTIIHLL----------KPQPREVVQDPAAGTAGFLIEADRYVKSQTND  197 (541)
T ss_dssp             ----------------------CCCCCHHHHHHHHHHH----------CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTT
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHH----------CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
T ss_conf             77999999999998761775875679899999999862----------89988730465778560579999999984366


Q ss_pred             CCCC--------CCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCC
Q ss_conf             0533--------32255046666788999999989808875334566668234754579998664189998168567653
Q gi|254780836|r  234 HKIP--------PILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKW  305 (674)
Q Consensus       234 ~~~~--------~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~W  305 (674)
                      ....        ....+||||+++.+|+||+|||++||++.+..  ...++..+++|..|.....+||+||+|||||..|
T Consensus       198 ~~~~~~~~~~~~~~~~~~G~E~~~~~~~la~~nl~l~g~~~~~~--~~~~~~~~~~l~~d~~~~~~fD~Vl~NPPfg~~~  275 (541)
T 2ar0_A          198 LDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLD--HGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAA  275 (541)
T ss_dssp             TTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGG--GTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCS
T ss_pred             CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCC--CCCCHHCCCCHHHCCCCCCCCCEEEECCCCCCCC
T ss_conf             21110467888887666302066999999986466345630113--4750210450433044443466687369976644


Q ss_pred             CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCC
Q ss_conf             10001112344226666535777747706599999999961466578807999738971347764432689999998849
Q gi|254780836|r  306 EKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLEND  385 (674)
Q Consensus       306 k~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ngs~LF~G~agsGEs~IRk~lie~d  385 (674)
                      ..+              ++..+.|+.++++++||||++++|++    |||+|+|+|.|+||+|++   ++.||++|++++
T Consensus       276 ~~~--------------~~~~~~~~~~~~~~~Fi~~~l~~Lk~----~Gr~aiIlP~~~Lf~~~~---~~~iR~~Lle~~  334 (541)
T 2ar0_A          276 GTN--------------ITRTFVHPTSNKQLCFMQHIIETLHP----GGRAAVVVPDNVLFEGGK---GTDIRRDLMDKC  334 (541)
T ss_dssp             SCC--------------CCSCCSSCCSCHHHHHHHHHHHHEEE----EEEEEEEEEHHHHHCCTH---HHHHHHHHHHHE
T ss_pred             CCC--------------CCCCCCCCCCCHHHHHHHHHHHHCCC----CCEEEEEECCCHHHCCHH---HHHHHHHHHHCC
T ss_conf             434--------------30002576552779999999997378----976999956820101000---079999998629


Q ss_pred             CEEEEEECCCCCCCCCCCCEEEEEEECCCCCCC------CCCEEEEECHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf             468883176776557886169999946887434------88389972367765764046644206989999999999721
Q gi|254780836|r  386 LIEAIVALPTDLFFRTNIATYLWILSNRKTEER------RGKVQLINATDLWTSIRNEGKKRRIINDDQRRQILDIYVSR  459 (674)
Q Consensus       386 ~ieaII~LP~~lFynTgI~t~Iwil~k~K~~~r------kgkV~lIDAs~~~~~~rk~G~Kr~~l~~~~i~~Iv~~y~~f  459 (674)
                      .|+|||.||+++||+|||+||||||+|+|+..+      +++|+||||+..+.+    +.|||+|+++||++|+++|..+
T Consensus       335 ~l~aII~LP~~~F~~t~v~t~Il~l~K~k~~~~~~~~~~~~~v~f~d~~~~~~~----~~k~~~l~~e~i~~i~~~y~~~  410 (541)
T 2ar0_A          335 HLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPNQDKNCTDDVWVYDLRTNMPS----FGKRTPFTDEHLQPFERVYGED  410 (541)
T ss_dssp             EEEEEEECCSSCSSSCSCCEEEEEEEEBCSSCTTCCSCCCCEEEEEECSTTCCC----CSSSSCCCGGGTHHHHHHHCSC
T ss_pred             EEEEEEECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEEHHHCCCC----CCCCCCCCHHHHHHHHHHHHHC
T ss_conf             189999787044789999769999989987765444577660799984321876----6698849999999999997213


Q ss_pred             CCCC
Q ss_conf             0254
Q gi|254780836|r  460 ENGK  463 (674)
Q Consensus       460 ~e~e  463 (674)
                      .++.
T Consensus       411 ~~~~  414 (541)
T 2ar0_A          411 PHGL  414 (541)
T ss_dssp             TTSC
T ss_pred             CCCC
T ss_conf             2234