HHsearch results for GI: 254780836 and protein with PDBid: 2dul_A

>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferase; tRNA modification enzyme, guanine 26, N(2),N(2)- dimethyltransferase; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=96.86  E-value=0.017  Score=34.42  Aligned_cols=109  Identities=15%  Similarity=0.177  Sum_probs=63.3

Q ss_pred             CCCCCCCCHHH-----HHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
Q ss_conf             66575368179-----9999999731784011013877640311766540468999999999853100533322550466
Q gi|254780836|r  172 EGAEDFMTPRD-----VVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQE  246 (674)
Q Consensus       172 ~~aGeffTPR~-----Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQE  246 (674)
                      +++.=||-|+.     +.-++++..          ++   .+|+|+.||||..   +..|.++.+.       ..++..|
T Consensus        22 ~~~~vFYNp~~~~nRDlsv~~~~~~----------~~---~~iLD~~sasG~r---~iRya~E~~~-------~~V~~nD   78 (378)
T 2dul_A           22 YDSPVFYNPRMALNRDIVVVLLNIL----------NP---KIVLDALSATGIR---GIRFALETPA-------EEVWLND   78 (378)
T ss_dssp             ---CCCCCGGGHHHHHHHHHHHHHH----------CC---SEEEESSCTTSHH---HHHHHHHSSC-------SEEEEEE
T ss_pred             CCCCEECCHHHHHHHHHHHHHHHHH----------CC---CEEEECCCCCHHH---HHHHHHHCCC-------CEEEEEE
T ss_conf             6686040866764316999999982----------99---9899978872299---9999985899-------8899996


Q ss_pred             CCHHHHHHHHHHHHHHCCCCCCCCCC------CC--CCCCCCCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf             66788999999989808875334566------66--823475457999866418999816856765
Q gi|254780836|r  247 LEPETHAVCVAGMLIRRLESDPRRDL------SK--NIQQGSTLSKDLFTGKRFHYCLSNPPFGKK  304 (674)
Q Consensus       247 in~~tyaIak~nMli~g~~~d~~~~~------~~--NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~  304 (674)
                      +|+.+..+.+.|+-+.++........      ..  .+..+|...--.-...+||+|--+| ||..
T Consensus        79 i~~~A~~~i~~N~~~N~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~~~~~~DvIDiDP-fGsp  143 (378)
T 2dul_A           79 ISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAERHRYFHFIDLDP-FGSP  143 (378)
T ss_dssp             SCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHHSTTCEEEEEECC-SSCC
T ss_pred             CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHCCCCCCEECCCC-CCCH
T ss_conf             9989999999999970865334333433224554367521127889874478774331389-9981