HHsearch results for GI: 254780836 and protein with PDBid: 2jjq_A
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=96.07 E-value=0.017 Score=34.37 Aligned_cols=95 Identities=14% Similarity=0.166 Sum_probs=59.5
Q ss_pred CCCCCCH-HHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
Q ss_conf 5753681-799999999731784011013877640311766540468999999999853100533322550466667889
Q gi|254780836|r 174 AEDFMTP-RDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETH 252 (674)
Q Consensus 174 aGeffTP-R~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~ty 252 (674)
+|-||-+ +.....|++.+. +. .++ ..|+|=.||+|.|=....+ .. ..++|.|.++.+.
T Consensus 267 p~sF~Q~N~~~~~~L~~~v~----~~---~~~--~~vlDLycG~G~fsl~LA~-------~~-----~~V~gvE~~~~av 325 (425)
T 2jjq_A 267 PNSFFQTNSYQAVNLVRKVS----EL---VEG--EKILDMYSGVGTFGIYLAK-------RG-----FNVKGFDSNEFAI 325 (425)
T ss_dssp TTSCCCSBHHHHHHHHHHHH----HH---CCS--SEEEEETCTTTHHHHHHHH-------TT-----CEEEEEESCHHHH
T ss_pred CCHHHHHCHHHHHHHHHHHH----CC---CCC--CEEEECCCCCCHHHHHHHH-------CC-----CEEEEEECCHHHH
T ss_conf 77043315576754212222----03---687--7787626786688899874-------28-----5545750468889
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCC
Q ss_conf 999999898088753345666682347545799986641899981685
Q gi|254780836|r 253 AVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPP 300 (674)
Q Consensus 253 aIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPP 300 (674)
.-|+.|.-+.+++.... ..++. ......||.|+.+||
T Consensus 326 ~~A~~na~~n~~~~~~~-------~~~~~----~~~~~~~D~vvlDPP 362 (425)
T 2jjq_A 326 EMARRNVEINNVDAEFE-------VASDR----EVSVKGFDTVIVDPP 362 (425)
T ss_dssp HHHHHHHHHHTCCEEEE-------ECCTT----TCCCTTCSEEEECCC
T ss_pred HHHHHHHHHCCCCEEEE-------EHHHH----HHHHCCCCEEEECCC
T ss_conf 99999898779707986-------40113----443069999999998