HHsearch results for GI: 254780836 and protein with PDBid: 2p35_A
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltransferase, structural genomics, PSI-2, protein structure initiative; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=97.00 E-value=0.0031 Score=39.15 Aligned_cols=116 Identities=17% Similarity=0.215 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 17999999997317840110138776403117665404689999999998531005333225504666678899999998
Q gi|254780836|r 180 PRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGM 259 (674)
Q Consensus 180 PR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nM 259 (674)
+|.+..|+..+ .+.....|.|-.||||.+.....++ .+. ..+.|.|+++.+-..|+.+.
T Consensus 19 ~~~~~~ll~~~-----------~~~~~~rVLDiGCGtG~~t~~la~~----~~~------~~v~gvD~S~~ml~~A~~~~ 77 (259)
T 2p35_A 19 TRPARDLLAQV-----------PLERVLNGYDLGCGPGNSTELLTDR----YGV------NVITGIDSDDDMLEKAADRL 77 (259)
T ss_dssp GHHHHHHHTTC-----------CCSCCSSEEEETCTTTHHHHHHHHH----HCT------TSEEEEESCHHHHHHHHHHS
T ss_pred HHHHHHHHHCC-----------CCCCCCEEEEECCCCCHHHHHHHHH----CCC------CEEEEEECCHHHHHHHHHHC
T ss_conf 66999999528-----------8889898999816286999999987----899------87999989879999999725
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 98088753345666682347545799986641899981685676531000111234422666653577774770659999
Q gi|254780836|r 260 LIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFL 339 (674)
Q Consensus 260 li~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFl 339 (674)
.++ .+..+|-..- . .+.+||+|++|= ...|-.+. . .++
T Consensus 78 --~~v----------~~~~~d~~~~-~-~~~~fD~V~s~~--~l~~~~d~-------------------------~-~~l 115 (259)
T 2p35_A 78 --PNT----------NFGKADLATW-K-PAQKADLLYANA--VFQWVPDH-------------------------L-AVL 115 (259)
T ss_dssp --TTS----------EEEECCTTTC-C-CSSCEEEEEEES--CGGGSTTH-------------------------H-HHH
T ss_pred --CCC----------CCEEEEHHHC-C-CCCCCCEECCCC--EEEECCCH-------------------------H-HHH
T ss_conf --663----------1201424212-4-354555641201--57746888-------------------------9-999
Q ss_pred HHHHHHHCCCCCCCCEEEEECCC
Q ss_conf 99999614665788079997389
Q gi|254780836|r 340 MHLANKLELPPNGGGRAAIVLSS 362 (674)
Q Consensus 340 qh~i~klk~~~~~ggr~aIV~ng 362 (674)
..+..-||| ||++++.+++
T Consensus 116 ~~~~~~Lkp----gG~l~~~~~~ 134 (259)
T 2p35_A 116 SQLMDQLES----GGVLAVQMPD 134 (259)
T ss_dssp HHHGGGEEE----EEEEEEEEEC
T ss_pred HHHHHHCCC----CEEEEEEECC
T ss_conf 999985399----8499999589