HHsearch results for GI: 254780836 and protein with PDBid: 2yqz_A
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus HB8} PDB: 2yr0_A
Probab=97.37 E-value=0.0009 Score=42.66 Aligned_cols=102 Identities=11% Similarity=0.039 Sum_probs=64.4
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 40311766540468999999999853100533322550466667889999999898088753345666682347545799
Q gi|254780836|r 206 IRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKD 285 (674)
Q Consensus 206 ~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d 285 (674)
..+|+|-.||||+++..... . ...++|.|+++..-++|+.++ .+...+ -++..+|.-.-
T Consensus 40 ~~~vLDiGcG~G~~t~~la~-------~-----~~~V~gvD~S~~~l~~a~~r~--~~~~~~------v~~~~~da~~l- 98 (263)
T 2yqz_A 40 EPVFLELGVGTGRIALPLIA-------R-----GYRYIALDADAAMLEVFRQKI--AGVDRK------VQVVQADARAI- 98 (263)
T ss_dssp CCEEEEETCTTSTTHHHHHT-------T-----TCEEEEEESCHHHHHHHHHHT--TTSCTT------EEEEESCTTSC-
T ss_pred CCEEEEECCCCCHHHHHHHH-------C-----CCEEEEEECCHHHHHHHHHHC--CCCCCC------CHHHHHCCCCC-
T ss_conf 99899951788699999996-------6-----998999989899999987402--101144------10222012223-
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 986641899981685676531000111234422666653577774770659999999996146657880799973
Q gi|254780836|r 286 LFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVL 360 (674)
Q Consensus 286 ~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ 360 (674)
.|++..||+|+++--+ .|-.+. -..+..+...||| ||++++..
T Consensus 99 ~~~~~sfD~V~~~~~l--~~~~d~--------------------------~~~l~e~~r~LkP----GG~l~~~~ 141 (263)
T 2yqz_A 99 PLPDESVHGVIVVHLW--HLVPDW--------------------------PKVLAEAIRVLKP----GGALLEGW 141 (263)
T ss_dssp CSCTTCEEEEEEESCG--GGCTTH--------------------------HHHHHHHHHHEEE----EEEEEEEE
T ss_pred CCCCCCCCEEEECCHH--HHCCCH--------------------------HHHHHHHHHHCCC----CCEEEEEE
T ss_conf 4667610478751227--755899--------------------------9999999998580----83899996