HHsearch results for GI: 254780836 and protein with PDBid: 2yx1_A

>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 2zzm_A*
Probab=98.39  E-value=4.8e-07  Score=64.05  Aligned_cols=93  Identities=13%  Similarity=0.061  Sum_probs=65.6

Q ss_pred             CCCCCHHHHHH--HHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
Q ss_conf             75368179999--9999731784011013877640311766540468999999999853100533322550466667889
Q gi|254780836|r  175 EDFMTPRDVVH--LATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETH  252 (674)
Q Consensus       175 GeffTPR~Vi~--Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~ty  252 (674)
                      .-||+||..-.  .|++++          .+  ..+|+|++||+|+|-+.+.        .     ...+++.|+||.+.
T Consensus       175 ~~~f~~~~~~er~ri~~~~----------~~--~~~vlD~f~g~G~~~i~~~--------~-----~~~v~a~d~n~~a~  229 (336)
T 2yx1_A          175 KVYFSPRLGGERARIMKKV----------SL--NDVVVDMFAGVGPFSIACK--------N-----AKKIYAIDINPHAI  229 (336)
T ss_dssp             TSCCCGGGHHHHHHHHHHC----------CT--TCEEEETTCTTSHHHHHTT--------T-----SSEEEEEESCHHHH
T ss_pred             HCEECCCCHHHHHHHHHHC----------CC--CCEEEEECCCCCHHHHHCC--------C-----CCEEEEEECCHHHH
T ss_conf             5662476107888766411----------78--9889996576467665313--------5-----51699997999999


Q ss_pred             HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf             99999989808875334566668234754579998664189998168567
Q gi|254780836|r  253 AVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFG  302 (674)
Q Consensus       253 aIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg  302 (674)
                      .+++-|.-+.++...      -.+..||....    ..+||.|++|||++
T Consensus       230 ~~~~~N~~~N~~~~~------v~~~~~D~~~~----~~~~D~Ii~~~P~~  269 (336)
T 2yx1_A          230 ELLKKNIKLNKLEHK------IIPILSDVREV----DVKGNRVIMNLPKF  269 (336)
T ss_dssp             HHHHHHHHHTTCTTT------EEEEESCGGGC----CCCEEEEEECCTTT
T ss_pred             HHHHHHHHHHCCCCC------EEEEECCHHHC----CCCCCEEEECCHHH
T ss_conf             999999998299875------89995753454----56874999658046