HHsearch results for GI: 254780836 and protein with PDBid: 2yx1_A
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 2zzm_A*
Probab=98.39 E-value=4.8e-07 Score=64.05 Aligned_cols=93 Identities=13% Similarity=0.061 Sum_probs=65.6
Q ss_pred CCCCCHHHHHH--HHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHH
Q ss_conf 75368179999--9999731784011013877640311766540468999999999853100533322550466667889
Q gi|254780836|r 175 EDFMTPRDVVH--LATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETH 252 (674)
Q Consensus 175 GeffTPR~Vi~--Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~ty 252 (674)
.-||+||..-. .|++++ .+ ..+|+|++||+|+|-+.+. . ...+++.|+||.+.
T Consensus 175 ~~~f~~~~~~er~ri~~~~----------~~--~~~vlD~f~g~G~~~i~~~--------~-----~~~v~a~d~n~~a~ 229 (336)
T 2yx1_A 175 KVYFSPRLGGERARIMKKV----------SL--NDVVVDMFAGVGPFSIACK--------N-----AKKIYAIDINPHAI 229 (336)
T ss_dssp TSCCCGGGHHHHHHHHHHC----------CT--TCEEEETTCTTSHHHHHTT--------T-----SSEEEEEESCHHHH
T ss_pred HCEECCCCHHHHHHHHHHC----------CC--CCEEEEECCCCCHHHHHCC--------C-----CCEEEEEECCHHHH
T ss_conf 5662476107888766411----------78--9889996576467665313--------5-----51699997999999
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCC
Q ss_conf 99999989808875334566668234754579998664189998168567
Q gi|254780836|r 253 AVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFG 302 (674)
Q Consensus 253 aIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg 302 (674)
.+++-|.-+.++... -.+..||.... ..+||.|++|||++
T Consensus 230 ~~~~~N~~~N~~~~~------v~~~~~D~~~~----~~~~D~Ii~~~P~~ 269 (336)
T 2yx1_A 230 ELLKKNIKLNKLEHK------IIPILSDVREV----DVKGNRVIMNLPKF 269 (336)
T ss_dssp HHHHHHHHHTTCTTT------EEEEESCGGGC----CCCEEEEEECCTTT
T ss_pred HHHHHHHHHHCCCCC------EEEEECCHHHC----CCCCCEEEECCHHH
T ss_conf 999999998299875------89995753454----56874999658046