HHsearch results for GI: 254780836 and protein with PDBid: 3c0k_A
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=98.34 E-value=4.9e-06 Score=57.46 Aligned_cols=104 Identities=13% Similarity=0.157 Sum_probs=74.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCH
Q ss_conf 27665753681799999999731784011013877640311766540468999999999853100533322550466667
Q gi|254780836|r 170 VSEGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEP 249 (674)
Q Consensus 170 ~~~~aGeffTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~ 249 (674)
.+.+.|=|.--|+.-+.+..+. .| .+|+|.+||||||=+.|... .+ ..+.+.|+++
T Consensus 198 ~g~ktG~flDqR~~R~~v~~~~-----------~g--~rVLdlf~~tG~~si~Aa~~------GA-----~~V~~vD~s~ 253 (396)
T 3c0k_A 198 HGHKTGYYLDQRDSRLATRRYV-----------EN--KRVLNCFSYTGGFAVSALMG------GC-----SQVVSVDTSQ 253 (396)
T ss_dssp TSSTTSSCGGGHHHHHHHHHHC-----------TT--CEEEEESCTTCSHHHHHHHT------TC-----SEEEEEESCH
T ss_pred CCCCCCCCHHHHHHHHHHHHHC-----------CC--CEEEECCCCCCHHHHHHHHC------CC-----CEEEEEECCH
T ss_conf 4675775530689999999765-----------99--86875388668899999977------99-----7599998989
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC---CCCCCCEEEEEEECCCCC
Q ss_conf 88999999989808875334566668234754579---998664189998168567
Q gi|254780836|r 250 ETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSK---DLFTGKRFHYCLSNPPFG 302 (674)
Q Consensus 250 ~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~---d~~~~~kFD~vlaNPPFg 302 (674)
...+.|+-|+-+.|.+...+ .+..+|.+.- -...+.+||.|+.+||.-
T Consensus 254 ~al~~a~~N~~~Ngl~~~~~-----~~i~~d~~~~l~~~~~~~~~fD~IilDPP~f 304 (396)
T 3c0k_A 254 EALDIARQNVELNKLDLSKA-----EFVRDDVFKLLRTYRDRGEKFDVIVMDPPKF 304 (396)
T ss_dssp HHHHHHHHHHHHTTCCGGGE-----EEEESCHHHHHHHHHHTTCCEEEEEECCSST
T ss_pred HHHHHHHHHHHHHCCCCCCC-----EEEECCHHHHHHHHHHHHCCCCEEEECCCCC
T ss_conf 99999999999829984345-----7894229999999987535999899878322