HHsearch results for GI: 254780836 and protein with PDBid: 3dli_A
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=92.53 E-value=0.03 Score=32.72 Aligned_cols=97 Identities=15% Similarity=0.250 Sum_probs=57.3
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC-C
Q ss_conf 031176654046899999999985310053332255046666788999999989808875334566668234754579-9
Q gi|254780836|r 207 RTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSK-D 285 (674)
Q Consensus 207 ~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~-d 285 (674)
.+|+|-.||+|.++-.. .+. + ..++|-|+++.....|+.+. + ...+|.+.. .
T Consensus 43 ~~vLDiGCG~G~~~~~l----~~~----g----~~v~GiD~s~~~i~~a~~~~-----~----------~~~~~~~~~~~ 95 (240)
T 3dli_A 43 RRVLDIGCGRGEFLELC----KEE----G----IESIGVDINEDMIKFCEGKF-----N----------VVKSDAIEYLK 95 (240)
T ss_dssp SCEEEETCTTTHHHHHH----HHH----T----CCEEEECSCHHHHHHHHTTS-----E----------EECSCHHHHHH
T ss_pred CEEEEECCCCCHHHHHH----HHC----C----CEEEEEECCHHHHHHHHHHC-----C----------CCHHHHHHHHC
T ss_conf 96999738785999999----977----9----95999967707878876511-----1----------00100666402
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHH-HHHHHHHHHHHCCCCCCCCEEEEECC
Q ss_conf 98664189998168567653100011123442266665357777477065-99999999961466578807999738
Q gi|254780836|r 286 LFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGS-MLFLMHLANKLELPPNGGGRAAIVLS 361 (674)
Q Consensus 286 ~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~-~lFlqh~i~klk~~~~~ggr~aIV~n 361 (674)
.+++.+||+|++.=-+- + +|+ .+ .-+++.+...|+| ||++.+..|
T Consensus 96 ~~~~~~fD~V~~~~vle-------------H-----------~~~---~~~~~~l~e~~r~Lkp----gG~li~~~p 141 (240)
T 3dli_A 96 SLPDKYLDGVMISHFVE-------------H-----------LDP---ERLFELLSLCYSKMKY----SSYIVIESP 141 (240)
T ss_dssp TSCTTCBSEEEEESCGG-------------G-----------SCG---GGHHHHHHHHHHHBCT----TCCEEEEEE
T ss_pred CCCCCCCCEEEEECEEE-------------E-----------CCH---HHHHHHHHHHHHHCCC----CCEEEEEEC
T ss_conf 35434765887621012-------------0-----------682---7899999999986084----978999977