HHsearch results for GI: 254780836 and protein with PDBid: 3dxy_A
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, tRNA processing; HET: SAM; 1.50A {Escherichia coli K12} PDB: 3dxx_A* 3dxz_A*
Probab=94.11 E-value=0.16 Score=27.92 Aligned_cols=115 Identities=18% Similarity=0.234 Sum_probs=69.7
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCCC--CC
Q ss_conf 311766540468999999999853100533322550466667889999999898088753345666682--34754--57
Q gi|254780836|r 208 TLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNI--QQGST--LS 283 (674)
Q Consensus 208 tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI--~~GdT--L~ 283 (674)
.|.|-.||+|.+|+..+. .+++ ..+.|.|+.+...+-|....--.|+ .|+ ..||. +.
T Consensus 37 liLEIGcG~G~~l~~~A~----~~P~------~~~iGiEi~~~~v~~a~~~~~~~~l---------~Ni~~~~~da~~~l 97 (218)
T 3dxy_A 37 VTLEIGFGMGASLVAMAK----DRPE------QDFLGIEVHSPGVGACLASAHEEGL---------SNLRVMCHDAVEVL 97 (218)
T ss_dssp EEEEESCTTCHHHHHHHH----HCTT------SEEEEECSCHHHHHHHHHHHHHTTC---------SSEEEECSCHHHHH
T ss_pred EEEEECCCCCHHHHHHHH----HCCC------CCEEEEEEECCCEEEEHHHCCHHHH---------CCCCEECCCHHHHH
T ss_conf 399972688899999999----6899------9889999723505530321201210---------45505645389999
Q ss_pred CCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
Q ss_conf 99986641899981685676531000111234422666653577774770659999999996146657880799973897
Q gi|254780836|r 284 KDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLSSS 363 (674)
Q Consensus 284 ~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ngs 363 (674)
...+++..||.|..|-|= +|-+.+ .++. |.- +--|+.-+...|++ ||++-+..+..
T Consensus 98 ~~~~~~~s~d~I~i~FPD--PWpKkk-----h~Kr----Rlv---------~~~fl~~l~~~Lk~----gG~l~l~TD~~ 153 (218)
T 3dxy_A 98 HKMIPDNSLRMVQLFFPD--PWHKAR-----HNKR----RIV---------QVPFAELVKSKLQL----GGVFHMATDWE 153 (218)
T ss_dssp HHHSCTTCEEEEEEESCC--CCCSGG-----GGGG----SSC---------SHHHHHHHHHHEEE----EEEEEEEESCH
T ss_pred HHHCCCCCCCCCEECCCC--CCCCCC-----CCCC----CCC---------CHHHHHHHHHHCCC----CCEEEEEECCH
T ss_conf 875245645443231688--777743-----2462----556---------15589999986288----98999997979
Q ss_pred CC
Q ss_conf 13
Q gi|254780836|r 364 PL 365 (674)
Q Consensus 364 ~L 365 (674)
.+
T Consensus 154 ~Y 155 (218)
T 3dxy_A 154 PY 155 (218)
T ss_dssp HH
T ss_pred HH
T ss_conf 99