HHsearch results for GI: 254780836 and protein with PDBid: 3ftd_A
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, antibiotic resistance, methyltransferase; 1.44A {Aquifex aeolicus VF5} PDB: 3ftc_A 3fte_A 3ftf_A*
Probab=96.01 E-value=0.016 Score=34.54 Aligned_cols=173 Identities=13% Similarity=0.158 Sum_probs=93.4
Q ss_pred CCCCCCCC-CHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCH
Q ss_conf 76657536-81799999999731784011013877640311766540468999999999853100533322550466667
Q gi|254780836|r 171 SEGAEDFM-TPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEP 249 (674)
Q Consensus 171 ~~~aGeff-TPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~ 249 (674)
.+.-||+| +-..+++-+|+.+ ......+|.+--+|+|. ||.+ +.+ . . .-.++..|+++
T Consensus 6 kk~lGQnFL~d~~~~~~iv~~~----------~~~~~d~VlEIGpG~G~-LT~~---Ll~---~-~---~~~v~aiE~D~ 64 (249)
T 3ftd_A 6 KKSFGQHLLVSEGVLKKIAEEL----------NIEEGNTVVEVGGGTGN-LTKV---LLQ---H-P---LKKLYVIELDR 64 (249)
T ss_dssp --CCCSSCEECHHHHHHHHHHT----------TCCTTCEEEEEESCHHH-HHHH---HTT---S-C---CSEEEEECCCH
T ss_pred CCCCCCCCCCCHHHHHHHHHHC----------CCCCCCEEEEECCCCCH-HHHH---HHH---H-C---CCEEEEEEECC
T ss_conf 7778845018989999999954----------89998949996998769-8999---997---0-4---57078999866
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 88999999989808875334566668234754579998664189998168567653100011123442266665357777
Q gi|254780836|r 250 ETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLP 329 (674)
Q Consensus 250 ~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP 329 (674)
..+.. ++... ...-+|..+|-|.-|.....+...|++|.||++.=
T Consensus 65 ~l~~~------l~~~~-----~~~~~ii~~D~l~~~~~~~~~~~~vVgNLPY~Iss------------------------ 109 (249)
T 3ftd_A 65 EMVEN------LKSIG-----DERLEVINEDASKFPFCSLGKELKVVGNLPYNVAS------------------------ 109 (249)
T ss_dssp HHHHH------HTTSC-----CTTEEEECSCTTTCCGGGSCSSEEEEEECCTTTHH------------------------
T ss_pred CCHHH------HHHHC-----CCCEEEEECCHHHCCHHHCCCCCEEEECCCHHHHH------------------------
T ss_conf 20013------22220-----44328996340117864629762586144210417------------------------
Q ss_pred CCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC-CCCC--CCCCCCCCCHHHHHHHHHH-CCCEEEEEECCCCCCCC-CCCC
Q ss_conf 4770659999999996146657880799973-8971--3477644326899999988-49468883176776557-8861
Q gi|254780836|r 330 KISDGSMLFLMHLANKLELPPNGGGRAAIVL-SSSP--LFNGRAGSGESEIRRWLLE-NDLIEAIVALPTDLFFR-TNIA 404 (674)
Q Consensus 330 ~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~-ngs~--LF~G~agsGEs~IRk~lie-~d~ieaII~LP~~lFyn-TgI~ 404 (674)
-.|.+.+..... -+.++++ .--+ =+.|..+.|--.+ ++. -.-++-+...|.+.|+- -.+-
T Consensus 110 -------~ii~~ll~~~~~-----~~~~vlmvQkEvA~Rl~~~~~y~~lSv---~~q~~~~~~~~~~V~~~~F~P~PkVd 174 (249)
T 3ftd_A 110 -------LIIENTVYNKDC-----VPLAVFMVQKEVAEKLQGKKDTGWLSV---FVRTFYDVNYVMTVPPRFFVPPPKVQ 174 (249)
T ss_dssp -------HHHHHHHHTGGG-----CSEEEEEEEHHHHHHHHTSSCCCHHHH---HHHHHEEEEEEEEECGGGEESCCSSC
T ss_pred -------HHHHHHHHCCCC-----CCEEEEEEEHHHHHHHCCCCCCCHHHH---HHHHHHHEEECCCCCHHHCCCCCCCC
T ss_conf -------999998731455-----300577675999987317889873469---99866431001456655468999623
Q ss_pred EEEEEEECCC
Q ss_conf 6999994688
Q gi|254780836|r 405 TYLWILSNRK 414 (674)
Q Consensus 405 t~Iwil~k~K 414 (674)
.+|.-|..++
T Consensus 175 S~vv~l~~~~ 184 (249)
T 3ftd_A 175 SAVIKLVKNE 184 (249)
T ss_dssp EEEEEEEECC
T ss_pred EEEEEEEECC
T ss_conf 5889987579