HHsearch results for GI: 254780836 and protein with PDBid: 3fzg_A
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=97.26 E-value=0.0014 Score=41.37 Aligned_cols=142 Identities=7% Similarity=0.019 Sum_probs=77.0
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 40311766540468999999999853100533322550466667889999999898088753345666682347545799
Q gi|254780836|r 206 IRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKD 285 (674)
Q Consensus 206 ~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d 285 (674)
..+|.|-.||||.++... .... ....++|.|+++...++|+.+.--.|.... ....+....
T Consensus 50 ~~~VLDiGCG~G~~~~~l----a~~~------p~~~v~gvD~s~~~l~~a~~~~~~~~~~~~--------~~~~~~~~~- 110 (200)
T 3fzg_A 50 VSSILDFGCGFNPLALYQ----WNEN------EKIIYHAYDIDRAEIAFLSSIIGKLKTTIK--------YRFLNKESD- 110 (200)
T ss_dssp CSEEEEETCTTHHHHHHH----HCSS------CCCEEEEECSCHHHHHHHHHHHHHSCCSSE--------EEEECCHHH-
T ss_pred CCEEEEECCCCCHHHHHH----HHHC------CCCEEEEEECCHHHHHHHHHHHHHCCCCEE--------EEEECHHHH-
T ss_conf 987999588678779999----9878------997899985999999999851023288515--------665101333-
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCC
Q ss_conf 98664189998168567653100011123442266665357777477065999999999614665788079997389713
Q gi|254780836|r 286 LFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVLSSSPL 365 (674)
Q Consensus 286 ~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ngs~L 365 (674)
.+..+||+|+++--+- | +.+ . + .+++++...|++ ||.+.+ .+-..+
T Consensus 111 -~~~~~fD~i~~~~~l~--~------~~~-----~--~-------------~~l~~~~~~L~~----gG~~v~-~~~~~~ 156 (200)
T 3fzg_A 111 -VYKGTYDVVFLLKMLP--V------LKQ-----Q--D-------------VNILDFLQLFHT----QNFVIS-FPIKSL 156 (200)
T ss_dssp -HTTSEEEEEEEETCHH--H------HHH-----T--T-------------CCHHHHHHTCEE----EEEEEE-EECCCC
T ss_pred -CCCCCCCEEEECCCHH--C------CCC-----H--H-------------HHHHHHHHHHCC----CCEEEE-EECCCC
T ss_conf -4478969898738332--3------788-----9--9-------------999999996079----958999-734334
Q ss_pred CCCCCCCC---HHHHHHHHHHCCCEEEEEECCCCCCCC
Q ss_conf 47764432---689999998849468883176776557
Q gi|254780836|r 366 FNGRAGSG---ESEIRRWLLENDLIEAIVALPTDLFFR 400 (674)
Q Consensus 366 F~G~agsG---Es~IRk~lie~d~ieaII~LP~~lFyn 400 (674)
.....+.. +..+.+.+-+..++.-.+.+|+.++|-
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~i 194 (200)
T 3fzg_A 157 SGKEKGMEENYQLWFESFTKGWIKILDSKVIGNELVYI 194 (200)
T ss_dssp C--CTTCCCCHHHHHHHHTTTTSCEEEEEEETTEEEEE
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEE
T ss_conf 77540556449999997633676055899606536833