HHsearch results for GI: 254780836 and protein with PDBid: 3g5t_A
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.01 E-value=8.5e-05 Score=49.36 Aligned_cols=126 Identities=16% Similarity=0.105 Sum_probs=78.7
Q ss_pred CCCCHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHH
Q ss_conf 53681799999999731784011013877640311766540468999999999853100533322550466667889999
Q gi|254780836|r 176 DFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVC 255 (674)
Q Consensus 176 effTPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIa 255 (674)
-.|+| +.+.+++++. +++..+|.|-+||||.+.....++. . ...+++|.|+++...+.+
T Consensus 19 p~y~~-~~~~~l~~~~-----------~~~~~~VLDiGCGtG~~t~~la~~~---~------~~~~V~gvD~S~~mi~~a 77 (299)
T 3g5t_A 19 PSYPS-DFYKMIDEYH-----------DGERKLLVDVGCGPGTATLQMAQEL---K------PFEQIIGSDLSATMIKTA 77 (299)
T ss_dssp CCCCH-HHHHHHHHHC-----------CSCCSEEEEETCTTTHHHHHHHHHS---S------CCSEEEEEESCHHHHHHH
T ss_pred CCCHH-HHHHHHHHCC-----------CCCCCEEEEECCCCCHHHHHHHHHC---C------CCCEEEEEECCHHHHHHH
T ss_conf 98419-9999999517-----------7899969998260889999999964---9------998799985988999999
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCC-----CCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 99989808875334566668234754-----5799986641899981685676531000111234422666653577774
Q gi|254780836|r 256 VAGMLIRRLESDPRRDLSKNIQQGST-----LSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPK 330 (674)
Q Consensus 256 k~nMli~g~~~d~~~~~~~NI~~GdT-----L~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~ 330 (674)
+...--.+..... -+...||- .....+++..||+|+++--+ .|- +.
T Consensus 78 ~~~~~~~~~~~~~-----v~~~~~dae~~~~~~~~~~~~~~fD~V~~~~~~--h~~-d~--------------------- 128 (299)
T 3g5t_A 78 EVIKEGSPDTYKN-----VSFKISSSDDFKFLGADSVDKQKIDMITAVECA--HWF-DF--------------------- 128 (299)
T ss_dssp HHHHHHCC-CCTT-----EEEEECCTTCCGGGCTTTTTSSCEEEEEEESCG--GGS-CH---------------------
T ss_pred HHHHHHCCCCCCE-----EEEEEECHHHCCCCCCCCCCCCCCCEEEEECCE--ECC-CH---------------------
T ss_conf 9999863667532-----468983377654421234665565478870036--315-61---------------------
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 770659999999996146657880799973
Q gi|254780836|r 331 ISDGSMLFLMHLANKLELPPNGGGRAAIVL 360 (674)
Q Consensus 331 ~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ 360 (674)
-.+++.+-..||| ||++++..
T Consensus 129 -----~~~l~e~~r~Lkp----gG~l~i~~ 149 (299)
T 3g5t_A 129 -----EKFQRSAYANLRK----DGTIAIWG 149 (299)
T ss_dssp -----HHHHHHHHHHEEE----EEEEEEEE
T ss_pred -----HHHHHHHHHHHHC----CCEEEEEE
T ss_conf -----7899999999523----99899997