HHsearch results for GI: 254780836 and protein with PDBid: 3gdh_A
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.70 E-value=9.6e-09 Score=75.12 Aligned_cols=96 Identities=15% Similarity=0.198 Sum_probs=69.9
Q ss_pred CHHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf 81799999999731784011013877640311766540468999999999853100533322550466667889999999
Q gi|254780836|r 179 TPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAG 258 (674)
Q Consensus 179 TPR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~n 258 (674)
||..|++.+++.+.. ..+..+|.|.+||+|++.+....+ . ..++|.|+++....+|+.|
T Consensus 61 tpe~ia~~ia~~~~~---------~~~~~~vlD~gcG~G~~~~~la~~--------~----~~v~~iD~s~~~i~~a~~n 119 (241)
T 3gdh_A 61 TPEKIAEHIAGRVSQ---------SFKCDVVVDAFCGVGGNTIQFALT--------G----MRVIAIDIDPVKIALARNN 119 (241)
T ss_dssp CCHHHHHHHHHHHHH---------HSCCSEEEETTCTTSHHHHHHHHT--------T----CEEEEEESCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH---------CCCCCEEEECCCCCCHHHHHHHHC--------C----CEEEEEECCHHHHHHHHHH
T ss_conf 869999999998650---------289998999378736889999967--------9----9899998977888999999
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCC
Q ss_conf 898088753345666682347545799986641899981685676
Q gi|254780836|r 259 MLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGK 303 (674)
Q Consensus 259 Mli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~ 303 (674)
+-..|+... -++..||.+.-. ...+||+|++|||++.
T Consensus 120 ~~~~~~~~~------i~~~~~D~~~~~--~~~~~D~i~~~pp~~~ 156 (241)
T 3gdh_A 120 AEVYGIADK------IEFICGDFLLLA--SFLKADVVFLSPPWGG 156 (241)
T ss_dssp HHHTTCGGG------EEEEESCHHHHG--GGCCCSEEEECCCCSS
T ss_pred HHHCCCCCC------EEEEECCHHHHH--HCCCCEEEEECCCCCC
T ss_conf 998499874------399976486641--4378449998378788