HHsearch results for GI: 254780836 and protein with PDBid: 3h2b_A
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=94.66 E-value=0.023 Score=33.44 Aligned_cols=139 Identities=15% Similarity=0.066 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHCCCCCHHCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 17999999997317840110138776403117665404689999999998531005333225504666678899999998
Q gi|254780836|r 180 PRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGM 259 (674)
Q Consensus 180 PR~Vi~Lmv~ll~~~~~~~~~~~p~~~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nM 259 (674)
.|.++.-++... +| .|+|-.||+|.++.. +.+. ...++|.|+++..-.+|+.+.
T Consensus 30 ~r~~i~~~~~~~-----------~g---rVLDiGcG~G~~~~~----la~~--------g~~v~gvD~S~~~l~~ar~~~ 83 (203)
T 3h2b_A 30 DRVLIEPWATGV-----------DG---VILDVGSGTGRWTGH----LASL--------GHQIEGLEPATRLVELARQTH 83 (203)
T ss_dssp THHHHHHHHHHC-----------CS---CEEEETCTTCHHHHH----HHHT--------TCCEEEECCCHHHHHHHHHHC
T ss_pred CHHHHHHHCCCC-----------CC---CEEEECCCCCHHHHH----HHHC--------CCEEEEEECCHHHHHHHHHCC
T ss_conf 399999851589-----------98---499973788799999----9977--------996999969788999997448
Q ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 98088753345666682347545799986641899981685676531000111234422666653577774770659999
Q gi|254780836|r 260 LIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFL 339 (674)
Q Consensus 260 li~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFl 339 (674)
.+ .+...+|-.. -.+++.+||+|+++=-+- + +|+.. .-.++
T Consensus 84 --~~----------~~~~~~d~~~-l~~~~~~fD~I~~~~vl~--h----------------------~~~~d--~~~~l 124 (203)
T 3h2b_A 84 --PS----------VTFHHGTITD-LSDSPKRWAGLLAWYSLI--H----------------------MGPGE--LPDAL 124 (203)
T ss_dssp --TT----------SEEECCCGGG-GGGSCCCEEEEEEESSST--T----------------------CCTTT--HHHHH
T ss_pred --CC----------CEEEECCCCC-CCCCCCCCCEEEEECCCC--C----------------------CCHHH--HHHHH
T ss_conf --87----------3499862101-223456666899946511--4----------------------99799--99999
Q ss_pred HHHHHHHCCCCCCCCEEEEECC-CCC---CCCCCCC---CCHHHHHHHHHHCCCE
Q ss_conf 9999961466578807999738-971---3477644---3268999999884946
Q gi|254780836|r 340 MHLANKLELPPNGGGRAAIVLS-SSP---LFNGRAG---SGESEIRRWLLENDLI 387 (674)
Q Consensus 340 qh~i~klk~~~~~ggr~aIV~n-gs~---LF~G~ag---sGEs~IRk~lie~d~i 387 (674)
+++...|+| ||++.+.+. +.. +...... -...++++.+-+.++-
T Consensus 125 ~~~~~~Lkp----gG~li~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aGf~ 175 (203)
T 3h2b_A 125 VALRMAVED----GGGLLMSFFSGPSLEPMYHPVATAYRWPLPELAQALETAGFQ 175 (203)
T ss_dssp HHHHHTEEE----EEEEEEEEECCSSCEEECCSSSCEEECCHHHHHHHHHHTTEE
T ss_pred HHHHHHCCC----CCEEEEEEECCCCCHHHCCCCCCCCCCCHHHHHHHHHHCCCE
T ss_conf 999987689----829999995588712103765654058999999999987998