HHsearch results for GI: 254780836 and protein with PDBid: 3k0b_A
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structural genomics; 1.50A {Listeria monocytogenes str}
Probab=99.14 E-value=1.6e-10 Score=86.80 Aligned_cols=91 Identities=19% Similarity=0.307 Sum_probs=60.3
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHH----------------------------HHHHCCCCCCEEEECCCCCHHHHHHHHH
Q ss_conf 403117665404689999999998----------------------------5310053332255046666788999999
Q gi|254780836|r 206 IRTLYDPTCGTGGFLTDAMNHVAD----------------------------CGSHHKIPPILVPHGQELEPETHAVCVA 257 (674)
Q Consensus 206 ~~tIyDPaCGTGGmL~~a~~~i~~----------------------------~~~~~~~~~~~~lyGQEin~~tyaIak~ 257 (674)
..+++||.||||.+|++|.-.... ............++|.|+++...+.|+.
T Consensus 202 ~~~llDPmCGSGTilIEAAl~a~~~~pg~~R~f~f~~~~~~~~~~w~~~~~~a~~~~~~~~~~~i~g~D~d~~ai~~a~~ 281 (393)
T 3k0b_A 202 DRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQ 281 (393)
T ss_dssp TSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHH
T ss_conf 98330678996679999999973878886624354422468999999999998754305887638999598999999999
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCC
Q ss_conf 98980887533456666823475457999866418999816856765
Q gi|254780836|r 258 GMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNPPFGKK 304 (674)
Q Consensus 258 nMli~g~~~d~~~~~~~NI~~GdTL~~d~~~~~kFD~vlaNPPFg~~ 304 (674)
|.---|+.... .+..+|-..-+ .....++|++|||||..
T Consensus 282 N~~~ag~~~~i------~~~~~d~~~~~--~~~~~~~iv~NPPYG~R 320 (393)
T 3k0b_A 282 NAVEAGLGDLI------TFRQLQVADFQ--TEDEYGVVVANPPYGER 320 (393)
T ss_dssp HHHHTTCTTCS------EEEECCGGGCC--CCCCSCEEEECCCCCCS
T ss_pred HHHHCCCCCHH------HHHHCCHHHCC--CCCCCCEEEECCCCHHH
T ss_conf 99973870000------03320197759--99999789988984411