HHsearch results for GI: 254780836 and protein with PDBid: 3mgg_A
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=96.82 E-value=0.013 Score=35.00 Aligned_cols=105 Identities=12% Similarity=0.104 Sum_probs=65.0
Q ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 40311766540468999999999853100533322550466667889999999898088753345666682347545799
Q gi|254780836|r 206 IRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKD 285 (674)
Q Consensus 206 ~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI~~GdTL~~d 285 (674)
+.+|.|-.||+|.++.... +..+ ...++|.|+++...+.++.+.--.+... -....||-. +-
T Consensus 38 g~rVLDiGcG~G~~~~~la----~~~~------~~~v~gvD~s~~~~~~a~~~~~~~~~~~-------v~~~~~d~~-~l 99 (276)
T 3mgg_A 38 GAKVLEAGCGIGAQTVILA----KNNP------DAEITSIDISPESLEKARENTEKNGIKN-------VKFLQANIF-SL 99 (276)
T ss_dssp TCEEEETTCTTSHHHHHHH----HHCT------TSEEEEEESCHHHHHHHHHHHHHTTCCS-------EEEEECCGG-GC
T ss_pred CCEEEEECCCCCHHHHHHH----HHCC------CCEEEEEECCHHHHHHHHHHHHHCCCCC-------CCEEECCHH-HC
T ss_conf 9989995585889999999----8799------9789999795676322221122115566-------421533523-20
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf 986641899981685676531000111234422666653577774770659999999996146657880799973
Q gi|254780836|r 286 LFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIVL 360 (674)
Q Consensus 286 ~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~lFlqh~i~klk~~~~~ggr~aIV~ 360 (674)
.++...||.|+++=-+ .|= | |. ..+|+.+-.-||| ||++++..
T Consensus 100 ~~~~~sfD~V~~~~~l--~~~----------------------~---d~-~~~l~~~~rvLkp----gG~l~~~~ 142 (276)
T 3mgg_A 100 PFEDSSFDHIFVCFVL--EHL----------------------Q---SP-EEALKSLKKVLKP----GGTITVIE 142 (276)
T ss_dssp CSCTTCEEEEEEESCG--GGC----------------------S---CH-HHHHHHHHHHEEE----EEEEEEEE
T ss_pred CCCCCCCCCHHHHHHH--HHC----------------------H---HH-HHHHHHHHHHCCC----CCEEEEEE
T ss_conf 4777881211111246--313----------------------0---59-9999999997480----85899997