HHsearch results for GI: 254780836 and protein with PDBid: 3ofk_A

>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=95.02  E-value=0.046  Score=31.54  Aligned_cols=100  Identities=16%  Similarity=0.216  Sum_probs=59.1

Q ss_pred             CEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC--CCCCCCC
Q ss_conf             40311766540468999999999853100533322550466667889999999898088753345666682--3475457
Q gi|254780836|r  206 IRTLYDPTCGTGGFLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNI--QQGSTLS  283 (674)
Q Consensus       206 ~~tIyDPaCGTGGmL~~a~~~i~~~~~~~~~~~~~~lyGQEin~~tyaIak~nMli~g~~~d~~~~~~~NI--~~GdTL~  283 (674)
                      ..+|.|-.||||.++..    +.   +.     ...+.|.|+++...+.|+...  .+.         .+|  ..+|-+.
T Consensus        52 ~~~vLDvGcG~G~~~~~----la---~~-----~~~v~gvD~s~~~l~~a~~~~--~~~---------~~i~~~~~d~~~  108 (216)
T 3ofk_A           52 VSNGLEIGCAAGAFTEK----LA---PH-----CKRLTVIDVMPRAIGRACQRT--KRW---------SHISWAATDILQ  108 (216)
T ss_dssp             EEEEEEECCTTSHHHHH----HG---GG-----EEEEEEEESCHHHHHHHHHHT--TTC---------SSEEEEECCTTT
T ss_pred             CCEEEEEECCCCHHHHH----HH---HH-----CCEEEEEECCHHHHHHHHHHH--CCC---------CEEECCCCCHHH
T ss_conf             99099963889899999----99---70-----998999969989999999861--546---------223101020223


Q ss_pred             CCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH-HHHHHHHHHHCCCCCCCCEEEEEC
Q ss_conf             99986641899981685676531000111234422666653577774770659-999999996146657880799973
Q gi|254780836|r  284 KDLFTGKRFHYCLSNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSM-LFLMHLANKLELPPNGGGRAAIVL  360 (674)
Q Consensus       284 ~d~~~~~kFD~vlaNPPFg~~Wk~~~~~v~~e~~~~~~~Rf~~glP~~sdg~~-lFlqh~i~klk~~~~~ggr~aIV~  360 (674)
                      .  .+..+||+|+++--+-  |                      +|..  .++ .++..+...|+|    ||++.|..
T Consensus       109 ~--~~~~~fD~V~~~~vl~--~----------------------~~~~--~~~~~~l~~~~~~L~p----gG~l~i~~  154 (216)
T 3ofk_A          109 F--STAELFDLIVVAEVLY--Y----------------------LEDM--TQMRTAIDNMVKMLAP----GGHLVFGS  154 (216)
T ss_dssp             C--CCSCCEEEEEEESCGG--G----------------------SSSH--HHHHHHHHHHHHTEEE----EEEEEEEE
T ss_pred             H--CCCCCCCEEEECCCHH--H----------------------CCCH--HHHHHHHHHHHHHCCC----CCEEEEEE
T ss_conf             2--3578714899845577--5----------------------8998--9999999999987798----83899996