PSIBLAST alignment of GI: 254780836 and protein with PDB id: 2okc
>gi|126031631|pdb|2OKC|A Chain A, Crystal Structure Of Type I Restriction Enzyme Stysji M Protein (Np_813429.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 2.20 A Resolution Length = 445
>gi|126031632|pdb|2OKC|B Chain B, Crystal Structure Of Type I Restriction Enzyme Stysji M Protein (Np_813429.1) From Bacteroides Thetaiotaomicron Vpi-5482 At 2.20 A Resolution Length = 445
Score = 177 bits (448), Expect = 7e-42, Method: Composition-based stats.
Identities = 85/465 (18%), Positives = 151/465 (32%), Gaps = 78/465 (16%)
Query: 4 FTGSAASLANFIWKNAEDLWGDFKHTD---FGKVILPFTLLRRLECALEPTRSAVREK-Y 59
+ + SL +W A L F I T L L + V
Sbjct: 5 NSSTEQSLTKKVWNLATTL-----AGQGIGFTDYITQLTYLLFL----KXDAENVEXFGE 55
Query: 60 LAFGGSNIDLESFVKVAGYSFYNTSEYSLSTLGSTNTRNNLESYIASFSDNAKAIFEDFD 119
+ + + G E +L L +NL I
Sbjct: 56 ESAIPTGYQWADLIAFDGLDLVKQYEETLKLLSE---LDNLIGTI--------------- 97
Query: 120 FSSTIARLEKAGLLYKICKNFSGIELHPDTVPDRVMSNIYEHLIRRFGSEVSEGAEDFMT 179
++ +++K L K+ + V IYE ++ + G + GA + T
Sbjct: 98 YTKAQNKIDKPVYLKKVITXIDEEQWL--IXDGDVKGAIYESILEKNGQDKKSGAGQYFT 155
Query: 180 PRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVADCGSHHKIP-- 237
PR ++ + +P T+ DP CGTGGFL A ++ + +
Sbjct: 156 PRPLIQAXVDCI----------NPQXGETVCDPACGTGGFLLTAYDYXKGQSASKEKRDF 205
Query: 238 -PILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCL 296
HG + P + + + + +D I +L K+ L
Sbjct: 206 LRDKALHGVDNTPLVVTLASXNLYLHGIGTDRSP-----IVCEDSLEKE--PSTLVDVIL 258
Query: 297 SNPPFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRA 356
+NPPFG + D + + + FL H L+ GGRA
Sbjct: 259 ANPPFGTRPAGSVDINRPDFYVE-----------TKNNQLNFLQHXXLXLKT----GGRA 303
Query: 357 AIVLSSSPLFNGRAGSGESEIRRWLLENDLIEAIVALPTDLFFRTNIATYLWILSNRKTE 416
A+VL + LF A GE+ IR+ LL++ + I+ LPT +F+ + + S +
Sbjct: 304 AVVLPDNVLFEAGA--GET-IRKRLLQDFNLHTILRLPTGIFYAQGVKANVLFFSKGQPT 360
Query: 417 ERRGKVQLINATDLWTSIRNEGKKRRIINDDQRRQILDIYVSREN 461
+ ++ + + + + + Y +R
Sbjct: 361 K---EIWFYD----YRTDIKHTLATNKLERHHLDDFVSCYNNRVE 398