RPSBLAST alignment of GI: 254780836 and protein with PDBid: 2ar0
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 Length = 541
Score = 140 bits (354), Expect = 7e-34
Identities = 91/470 (19%), Positives = 164/470 (34%), Gaps = 74/470 (15%)
Query: 11 LANFIWKNAEDLW-GDFKHTDFGKVILPFTLLRRLECALEPTRSAVREKYLAFGGSNIDL 69
L +WK ++L G + ++ + L+ + + +YL G DL
Sbjct: 8 LVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQ------EAEYLPEGYRWDDL 61
Query: 70 ESFVKVAGYSFYNTSEYSLSTLGSTNTRNNLESYIASFSDNAKAIFEDFDFSSTIARLEK 129
+S + FY L +A+F + + +
Sbjct: 62 KSRIGQEQLQFYR---------------KMLVHLGEDDKKLVQAVFHNVST-----TITE 101
Query: 130 AGLLYKICKNFSGIELH--PDTVPDRVMSNIYEHLIRRFGSEVSEGAEDFMTPRDVVHLA 187
+ + N ++ + ++YE L+++ +E GA + TPR ++
Sbjct: 102 PKQITALVSNMDSLDWYNGAHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTI 161
Query: 188 TALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVAD--------CGSHHKIPPI 239
LL P + DP GT GFL +A +V G
Sbjct: 162 IHLL----------KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIH 211
Query: 240 LVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNP 299
G EL P T + + L+ +E + D I+ G+TL D + H +NP
Sbjct: 212 RAFIGLELVPGTRRLALMNCLLHDIEGN--LDHGGAIRLGNTLGSDGENLPKAHIVATNP 269
Query: 300 PFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIV 359
PFG + + S+ + F+ H+ L + GGRAA+V
Sbjct: 270 PFGSAAGTN--------------ITRTFVHPTSNKQLCFMQHIIETL----HPGGRAAVV 311
Query: 360 LSSSPLFNGRAGSGESEIRRWLLENDLIEAIVALPTDLFFRTNIATYLWILSNRKTEERR 419
+ + LF G ++IRR L++ + I+ LPT +F+ + T + +
Sbjct: 312 VPDNVLFEGGK---GTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPN 368
Query: 420 GKVQLINAT---DLWTSIRNEGKKRRIINDDQRRQILDIYVSRENGKFSR 466
+ DL T++ + KR D+ + +Y +G R
Sbjct: 369 QDKNCTDDVWVYDLRTNMPS-FGKRTPFTDEHLQPFERVYGEDPHGLSPR 417