RPSBLAST alignment of GI: 254780836 and protein with PDBid: 2ar0

>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 Length = 541
 Score =  140 bits (354), Expect = 7e-34
 Identities = 91/470 (19%), Positives = 164/470 (34%), Gaps = 74/470 (15%)

Query: 11  LANFIWKNAEDLW-GDFKHTDFGKVILPFTLLRRLECALEPTRSAVREKYLAFGGSNIDL 69
           L   +WK  ++L  G   + ++   +     L+  +   +        +YL  G    DL
Sbjct: 8   LVAKLWKLCDNLRDGGVSYQNYVNELASLLFLKMCKETGQ------EAEYLPEGYRWDDL 61

Query: 70  ESFVKVAGYSFYNTSEYSLSTLGSTNTRNNLESYIASFSDNAKAIFEDFDFSSTIARLEK 129
           +S +      FY                  L           +A+F +         + +
Sbjct: 62  KSRIGQEQLQFYR---------------KMLVHLGEDDKKLVQAVFHNVST-----TITE 101

Query: 130 AGLLYKICKNFSGIELH--PDTVPDRVMSNIYEHLIRRFGSEVSEGAEDFMTPRDVVHLA 187
              +  +  N   ++ +            ++YE L+++  +E   GA  + TPR ++   
Sbjct: 102 PKQITALVSNMDSLDWYNGAHGKSRDDFGDMYEGLLQKNANETKSGAGQYFTPRPLIKTI 161

Query: 188 TALLLDPDDALFKESPGMIRTLYDPTCGTGGFLTDAMNHVAD--------CGSHHKIPPI 239
             LL           P     + DP  GT GFL +A  +V           G        
Sbjct: 162 IHLL----------KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIH 211

Query: 240 LVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQGSTLSKDLFTGKRFHYCLSNP 299
               G EL P T  + +   L+  +E +   D    I+ G+TL  D     + H   +NP
Sbjct: 212 RAFIGLELVPGTRRLALMNCLLHDIEGN--LDHGGAIRLGNTLGSDGENLPKAHIVATNP 269

Query: 300 PFGKKWEKDKDAVEKEHKNGELGRFGPGLPKISDGSMLFLMHLANKLELPPNGGGRAAIV 359
           PFG     +                   +   S+  + F+ H+   L    + GGRAA+V
Sbjct: 270 PFGSAAGTN--------------ITRTFVHPTSNKQLCFMQHIIETL----HPGGRAAVV 311

Query: 360 LSSSPLFNGRAGSGESEIRRWLLENDLIEAIVALPTDLFFRTNIATYLWILSNRKTEERR 419
           +  + LF G      ++IRR L++   +  I+ LPT +F+   + T +   +        
Sbjct: 312 VPDNVLFEGGK---GTDIRRDLMDKCHLHTILRLPTGIFYAQGVKTNVLFFTKGTVANPN 368

Query: 420 GKVQLINAT---DLWTSIRNEGKKRRIINDDQRRQILDIYVSRENGKFSR 466
                 +     DL T++ +   KR    D+  +    +Y    +G   R
Sbjct: 369 QDKNCTDDVWVYDLRTNMPS-FGKRTPFTDEHLQPFERVYGEDPHGLSPR 417