RPSBLAST alignment of GI: 254780836 and protein with PDBid: 2ih2
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A* Length = 421
Score = 90.7 bits (224), Expect = 1e-18
Identities = 36/261 (13%), Positives = 67/261 (25%), Gaps = 48/261 (18%)
Query: 159 YEHLIRRFGSEVSEGAEDFMTPRDVVHLATALLLDPDDALFKESPGMIRTLYDPTCGTGG 218
L+ + TP +VV +L P + +P C G
Sbjct: 3 LPPLLSLPSNSAPRSLGRVETPPEVVDFMVSLAEAPRGG----------RVLEPACAHGP 52
Query: 219 FLTDAMNHVADCGSHHKIPPILVPHGQELEPETHAVCVAGMLIRRLESDPRRDLSKNIQQ 278
FL ++ G E++P+ + I
Sbjct: 53 FLRAFREAHGT---AYRF------VGVEIDPKALDLPPWAEGI----------------L 87
Query: 279 GSTLSKDLFTGKRFHYCLSNPPFGKKWEKDKDAVEK-EHKNGELGRFGPGLPKISDGSML 337
L + G+ F L NPP+G E K + + + +
Sbjct: 88 ADFLLWEP--GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGA 145
Query: 338 FLMHLANKLELPPNGGGRAAIVLSSSPLFNGRAGSGESEIRRWLLENDLIEAIVALPTDL 397
FL L GG V+ ++ L + +R +L ++
Sbjct: 146 FLEKAVRLL----KPGGVLVFVVPATWLV----LEDFALLREFLAREGKTSVY--YLGEV 195
Query: 398 FFRTNIATYLWILSNRKTEER 418
F + ++ +
Sbjct: 196 FPQKKVSAVVIRFQKSGKGLS 216