HHsearch alignment for GI: 254780837 and conserved domain: COG0732
>COG0732 HsdS Restriction endonuclease S subunits [Defense mechanisms].
Probab=99.70 E-value=3.2e-16 Score=119.47 Aligned_cols=188 Identities=26% Similarity=0.284 Sum_probs=118.7
Q ss_pred CCCCCCEEEECCCEEEEEECCC--CCCCCC--EEEEEEEEEEECCCEEEECCCCCCCCCCC-CEEEECCCCEEEEEECCC
Q ss_conf 0689886988412399850667--888775--36887000020641233112222346655-337842897899942287
Q gi|254780837|r 20 AIPKHWKVVPIKRFTKLNTGRT--SESGKD--IIYIGLEDVESGTGKYLPKDGNSRQSDTS-TVSIFAKGQILYGKLGPY 94 (426)
Q Consensus 20 ~iP~~We~~kL~~i~~i~~g~~--~~~~~~--~~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~gDil~s~~g~~ 94 (426)
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 272 (391)
T COG0732 193 SIPEDWKVIKLKDIVEIISGGTKIKPLEKGVNVSYGKNPVLNGGEPNNGDIVKLSRIDNFIYGLKLSGGKYITLSSSGAT 272 (391)
T ss_pred CCCCCCEECCCHHHEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEECCCCHHHHHHHCCCCCEEEECCCCCE
T ss_conf 46656401130033021366754555445555021134433565346765223114541555443045752563144424
Q ss_pred CCEEEEECC--CEEEECCEEEECCCCC-C-CHHHHHHHCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHHHHHHHH
Q ss_conf 523798346--4899074387146667-8-70222221117788988831568716665266634455544332345779
Q gi|254780837|r 95 LRKAIIADF--DGICSTQFLVLQPKDV-L-PELLQGWLLSIDVTQRIEAICEGATMSHADWKGIGNIPMPIPPLAEQVLI 170 (426)
Q Consensus 95 ~g~~~i~~~--~~~~~~~~~vl~~~~~-~-~~fl~y~l~s~~~~~~~~~~~~Gs~~~~i~~~~l~~~~iplPpl~eQ~kI 170 (426)
T Consensus 273 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~s~~~~~~~~~~~~gs~~~~l~~~~l~~~~i~iPpl~eQ~~i 352 (391)
T COG0732 273 IGIAIINNGTLKFILSQGIGILRIENKVEGEKFLYYYLSSEFFKKIIKKVSKGSTIPRLNKKLLEEIPIPIPPLEEQQKI 352 (391)
T ss_pred EEEEEECCCCCEEEECCCEEEEEECCCCCHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHEECCCCCHHHHHHH
T ss_conf 56886146652035327558985155320378899997267678999986037865533653264314279999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999988877654333222236889999999986
Q gi|254780837|r 171 REKIIAETVRIDTLITERIRFIELLKEKKQALVSYIVT 208 (426)
Q Consensus 171 v~~Ld~~~~~Id~~I~~~~~~i~~l~e~kqali~~~~t 208 (426)
T Consensus 353 ~~~l~~l~~~i~~~~~~-~~~~~~~~~~~~~~l~~l~~ 389 (391)
T COG0732 353 AEILSALDKLIDILNRK-PAELEALKKQLDYLLNKLLT 389 (391)
T ss_pred HHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999999985257-77899999999998777553