HHsearch alignment for GI: 254780837 and conserved domain: PRK09737
>PRK09737 EcoKI restriction-modification system protein HsdS; Provisional.
Probab=100.00 E-value=0 Score=480.61 Aligned_cols=398 Identities=17% Similarity=0.248 Sum_probs=312.2
Q ss_pred CCCCCCCCEEEECCCEEEEEECCCCCCC--------CCEEEEEEEEEEECCCEEEECCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf 3706898869884123998506678887--------75368870000206412331122223466553378428978999
Q gi|254780837|r 18 IGAIPKHWKVVPIKRFTKLNTGRTSESG--------KDIIYIGLEDVESGTGKYLPKDGNSRQSDTSTVSIFAKGQILYG 89 (426)
Q Consensus 18 ~g~iP~~We~~kL~~i~~i~~g~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~gDil~s 89 (426)
T Consensus 3 ~GelP~gW~~~rLgdI~~~~~G~t~~k~~~~~~~~~g~ip~i~~~di~~g~i~~~~~~~~~~~~~~~~~~~~~~gdiLi~ 82 (459)
T PRK09737 3 AGKLPEGWVTTHISEICSVIRGVKPPKGYATKSLTMGDLPFIRTTDITNGAVDLTTLPYCMDAPEDVSKYQLQDRDIVIS 82 (459)
T ss_pred CCCCCCCCEEEECHHEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCEEECCCHHHHCCCCCCCCEEEEE
T ss_conf 99799997899904617982787079755454457897579973315688465356557045253420044789969998
Q ss_pred EECCCCCEEEEECC----CEEEECCEEEECCCC-CCCHHHHHHHCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHH
Q ss_conf 42287523798346----489907438714666-7870222221117788988831568716665266634455544332
Q gi|254780837|r 90 KLGPYLRKAIIADF----DGICSTQFLVLQPKD-VLPELLQGWLLSIDVTQRIEAICEGATMSHADWKGIGNIPMPIPPL 164 (426)
Q Consensus 90 ~~g~~~g~~~i~~~----~~~~~~~~~vl~~~~-~~~~fl~y~l~s~~~~~~~~~~~~Gs~~~~i~~~~l~~~~iplPpl 164 (426)
T Consensus 83 ~~gtiG-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~s~~~~~~i~~~~~G~~~~~i~~~~l~~~~iPlPPL 161 (459)
T PRK09737 83 SAGSIG-FSFLAQNPLPSNVVFASFAIRLKPVNYFSEYFLKHFLESSDYWNQLSLMSAGNAVQNINAQSLSTLTFPIPPI 161 (459)
T ss_pred CCCCCE-EEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCH
T ss_conf 278860-4899776466650476578970565332399999999677999999853676113415888870546068999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHCCCC
Q ss_conf 34577999999999988877654333222236889999999986078810002357500068686656433024310134
Q gi|254780837|r 165 AEQVLIREKIIAETVRIDTLITERIRFIELLKEKKQALVSYIVTKGLNPDVKMKDSGIEWVGLVPDHWEVKPFFALVTEL 244 (426)
Q Consensus 165 ~eQ~kIv~~Ld~~~~~Id~~I~~~~~~i~~l~e~kqali~~~~tk~L~p~~~~k~s~~e~lG~IP~~W~~~~l~~~~~~~ 244 (426)
T Consensus 162 ~EQkrIv~~Ld~l~~~id~~~~~~e~~~~llk~~rq~iL~~av~g~l~~~~~~--------~~~p~~W~~~~l~~i~~~~ 233 (459)
T PRK09737 162 AEQKIIAEKLDTLLAQVDSTKARLEQIPQILKRFRQAVLGAAVSGKLTEEWRW--------PDLPSTWSVHKYSELVDSR 233 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------CCCCCCCEEEEHHHHHCCC
T ss_conf 99999999999999999999999999999999999999999864877534567--------8998885798868941243
Q ss_pred CCCCC--CCCCCEEEEECCCCCCCCCCCC-CCCEEC-CCCCCCEEECCCCEEEEEECCC--CCEEEEEEECCCCCEEEEC
Q ss_conf 56764--4443215774045532465322-121000-4433202422884899742166--4037999502356607741
Q gi|254780837|r 245 NRKNT--KLIESNILSLSYGNIIQKLETR-NMGLKP-ESYETYQIVDPGEIVFRFIDLQ--NDKRSLRSAQVMERGIITS 318 (426)
Q Consensus 245 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~gdil~~~~~~~--~~~~~~~~~~~~~~~~~~~ 318 (426)
T Consensus 234 ~~g~~~k~~~~~~~~~~~~~ni~~~~i~~~~~~~~~~~~~~~~~~l~~GDiL~~~~g~~~~vG~~ai~~~~~~~~~~~~~ 313 (459)
T PRK09737 234 LGGMSSKANNFGSATKYLLGNIDQNNVRWFSFDLENSDIERRELKLKLGDVLFCRGGSPEFVGRCAIWKEPQDIPVIYQK 313 (459)
T ss_pred CCCCCCCCCCCCCCCEEEECEEECCEEEECCEEEEECHHHHHHCCCCCCCEEEECCCCHHHCEEEEEECCCCCCCEEECC
T ss_conf 68868886447987879756242680554000475033234231477898899887874447379997566665536346
Q ss_pred HHEECCCC-CCCHHHHHHHHHCHHHHHHH-HHHC-CCEEEEECHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 11430577-68868899997098999999-8625-840410028898247214898899999999999999999999999
Q gi|254780837|r 319 AYMAVKPH-GIDSTYLAWLMRSYDLCKVF-YAMG-SGLRQSLKFEDVKRLPVLVPPIKEQFDITNVINVETARIDVLVEK 395 (426)
Q Consensus 319 ~~~~~~~~-~~~~~yl~~~l~s~~~~~~~-~~~~-~g~~~~i~~~~l~~~~i~lP~leeQ~~I~~~l~~~~~~id~li~~ 395 (426)
T Consensus 314 ~~~~~r~~~~i~~~fl~~~l~s~~~~~~~~~~~~~G~~~~~in~~~i~~~~iplPPL~EQ~~IV~~ld~l~~~~d~l~~~ 393 (459)
T PRK09737 314 ALIRARVKDDIIPEYLVYNLKSPDSRNISLSQLFTGTTQKHITGKALANYPIRVPPLEEQAEIVRRVEQLFAYADTIEKQ 393 (459)
T ss_pred EEEEEECCHHHCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 38997232110699999997199999999998604677777898987038744899999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHCCEEECCCC
Q ss_conf 99999999999999778862233614876
Q gi|254780837|r 396 IEQSIVLLKERRSSFIAAAVTGQIDLRGE 424 (426)
Q Consensus 396 ~~~~i~~L~~lk~sLl~~a~tGki~V~~~ 424 (426)
T Consensus 394 ~~~~~~~l~~l~qSiL~kAF~GeLv~qdp 422 (459)
T PRK09737 394 VNNALARVNNLTQSILAKAFRGELTAQWR 422 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 99999999999999999996874568897