HHsearch alignment for GI: 254780837 and conserved domain: PRK09737

>PRK09737 EcoKI restriction-modification system protein HsdS; Provisional.
Probab=100.00  E-value=0  Score=480.61  Aligned_cols=398  Identities=17%  Similarity=0.248  Sum_probs=312.2

Q ss_pred             CCCCCCCCEEEECCCEEEEEECCCCCCC--------CCEEEEEEEEEEECCCEEEECCCCCCCCCCCCEEEECCCCEEEE
Q ss_conf             3706898869884123998506678887--------75368870000206412331122223466553378428978999
Q gi|254780837|r   18 IGAIPKHWKVVPIKRFTKLNTGRTSESG--------KDIIYIGLEDVESGTGKYLPKDGNSRQSDTSTVSIFAKGQILYG   89 (426)
Q Consensus        18 ~g~iP~~We~~kL~~i~~i~~g~~~~~~--------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~gDil~s   89 (426)
T Consensus         3 ~GelP~gW~~~rLgdI~~~~~G~t~~k~~~~~~~~~g~ip~i~~~di~~g~i~~~~~~~~~~~~~~~~~~~~~~gdiLi~   82 (459)
T PRK09737          3 AGKLPEGWVTTHISEICSVIRGVKPPKGYATKSLTMGDLPFIRTTDITNGAVDLTTLPYCMDAPEDVSKYQLQDRDIVIS   82 (459)
T ss_pred             CCCCCCCCEEEECHHEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCCCEEECCCCEEECCCHHHHCCCCCCCCEEEEE
T ss_conf             99799997899904617982787079755454457897579973315688465356557045253420044789969998


Q ss_pred             EECCCCCEEEEECC----CEEEECCEEEECCCC-CCCHHHHHHHCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHHH
Q ss_conf             42287523798346----489907438714666-7870222221117788988831568716665266634455544332
Q gi|254780837|r   90 KLGPYLRKAIIADF----DGICSTQFLVLQPKD-VLPELLQGWLLSIDVTQRIEAICEGATMSHADWKGIGNIPMPIPPL  164 (426)
Q Consensus        90 ~~g~~~g~~~i~~~----~~~~~~~~~vl~~~~-~~~~fl~y~l~s~~~~~~~~~~~~Gs~~~~i~~~~l~~~~iplPpl  164 (426)
T Consensus        83 ~~gtiG-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~l~s~~~~~~i~~~~~G~~~~~i~~~~l~~~~iPlPPL  161 (459)
T PRK09737         83 SAGSIG-FSFLAQNPLPSNVVFASFAIRLKPVNYFSEYFLKHFLESSDYWNQLSLMSAGNAVQNINAQSLSTLTFPIPPI  161 (459)
T ss_pred             CCCCCE-EEEEECCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCCCCCHHHHCCCEECCCCH
T ss_conf             278860-4899776466650476578970565332399999999677999999853676113415888870546068999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCCCCCCHHHHCCCC
Q ss_conf             34577999999999988877654333222236889999999986078810002357500068686656433024310134
Q gi|254780837|r  165 AEQVLIREKIIAETVRIDTLITERIRFIELLKEKKQALVSYIVTKGLNPDVKMKDSGIEWVGLVPDHWEVKPFFALVTEL  244 (426)
Q Consensus       165 ~eQ~kIv~~Ld~~~~~Id~~I~~~~~~i~~l~e~kqali~~~~tk~L~p~~~~k~s~~e~lG~IP~~W~~~~l~~~~~~~  244 (426)
T Consensus       162 ~EQkrIv~~Ld~l~~~id~~~~~~e~~~~llk~~rq~iL~~av~g~l~~~~~~--------~~~p~~W~~~~l~~i~~~~  233 (459)
T PRK09737        162 AEQKIIAEKLDTLLAQVDSTKARLEQIPQILKRFRQAVLGAAVSGKLTEEWRW--------PDLPSTWSVHKYSELVDSR  233 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC--------CCCCCCCEEEEHHHHHCCC
T ss_conf             99999999999999999999999999999999999999999864877534567--------8998885798868941243


Q ss_pred             CCCCC--CCCCCEEEEECCCCCCCCCCCC-CCCEEC-CCCCCCEEECCCCEEEEEECCC--CCEEEEEEECCCCCEEEEC
Q ss_conf             56764--4443215774045532465322-121000-4433202422884899742166--4037999502356607741
Q gi|254780837|r  245 NRKNT--KLIESNILSLSYGNIIQKLETR-NMGLKP-ESYETYQIVDPGEIVFRFIDLQ--NDKRSLRSAQVMERGIITS  318 (426)
Q Consensus       245 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~gdil~~~~~~~--~~~~~~~~~~~~~~~~~~~  318 (426)
T Consensus       234 ~~g~~~k~~~~~~~~~~~~~ni~~~~i~~~~~~~~~~~~~~~~~~l~~GDiL~~~~g~~~~vG~~ai~~~~~~~~~~~~~  313 (459)
T PRK09737        234 LGGMSSKANNFGSATKYLLGNIDQNNVRWFSFDLENSDIERRELKLKLGDVLFCRGGSPEFVGRCAIWKEPQDIPVIYQK  313 (459)
T ss_pred             CCCCCCCCCCCCCCCEEEECEEECCEEEECCEEEEECHHHHHHCCCCCCCEEEECCCCHHHCEEEEEECCCCCCCEEECC
T ss_conf             68868886447987879756242680554000475033234231477898899887874447379997566665536346


Q ss_pred             HHEECCCC-CCCHHHHHHHHHCHHHHHHH-HHHC-CCEEEEECHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             11430577-68868899997098999999-8625-840410028898247214898899999999999999999999999
Q gi|254780837|r  319 AYMAVKPH-GIDSTYLAWLMRSYDLCKVF-YAMG-SGLRQSLKFEDVKRLPVLVPPIKEQFDITNVINVETARIDVLVEK  395 (426)
Q Consensus       319 ~~~~~~~~-~~~~~yl~~~l~s~~~~~~~-~~~~-~g~~~~i~~~~l~~~~i~lP~leeQ~~I~~~l~~~~~~id~li~~  395 (426)
T Consensus       314 ~~~~~r~~~~i~~~fl~~~l~s~~~~~~~~~~~~~G~~~~~in~~~i~~~~iplPPL~EQ~~IV~~ld~l~~~~d~l~~~  393 (459)
T PRK09737        314 ALIRARVKDDIIPEYLVYNLKSPDSRNISLSQLFTGTTQKHITGKALANYPIRVPPLEEQAEIVRRVEQLFAYADTIEKQ  393 (459)
T ss_pred             EEEEEECCHHHCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             38997232110699999997199999999998604677777898987038744899999999999999999999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHCCEEECCCC
Q ss_conf             99999999999999778862233614876
Q gi|254780837|r  396 IEQSIVLLKERRSSFIAAAVTGQIDLRGE  424 (426)
Q Consensus       396 ~~~~i~~L~~lk~sLl~~a~tGki~V~~~  424 (426)
T Consensus       394 ~~~~~~~l~~l~qSiL~kAF~GeLv~qdp  422 (459)
T PRK09737        394 VNNALARVNNLTQSILAKAFRGELTAQWR  422 (459)
T ss_pred             HHHHHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             99999999999999999996874568897