HHsearch alignment of GI: 254780837 and MMDB domain: 1yf2_A_7-27_146-167

>1yf2_A (A:7-27,A:146-167) Type I restriction-modification enzyme, S subunit; structural genomics, PSI, protein structure initiative; 2.40A {Methanocaldococcus jannaschii DSM2661}

Probab=93.49  E-value=0.02  Score=33.22  Aligned_cols=21  Identities=38%  Similarity=0.983  Sum_probs=11.8

Q ss_pred             HCCCCCCCCCCCCCCCEEEECCCE
Q ss_conf             325899623706898869884123
Q gi|254780837|r   10 YKDSGVQWIGAIPKHWKVVPIKRF   33 (426)
Q Consensus        10 ~k~s~~~w~g~iP~~We~~kL~~i   33 (426)
                      ||-++   ||+||++|+++.|++.
T Consensus         2 fkkte---igeipedweivelkdm   22 (43)
T 1yf2_A            2 FKKTE---IGEIPEDWEIVELKDM   22 (43)
T ss_dssp             CBCCS---SSSCBSSCCCEEHHHS
T ss_pred             CCCCC---CCCCCCCCEEEEHHHC
T ss_conf             67798---9836997789994896