HHsearch results for GI: 254780837 and protein with PDBid: 2ih2_A
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5- methylpyrimidin-2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=92.89 E-value=0.055 Score=29.49 Aligned_cols=82 Identities=12% Similarity=0.063 Sum_probs=51.3
Q ss_pred EECCCCEEEEEECCCCCEEEEEEECCCCCEEEECHHEECCCC--CCCHHHHHHHHHCHHHHHHHHHHCCCEEEEECHHHH
Q ss_conf 422884899742166403799950235660774111430577--688688999970989999998625840410028898
Q gi|254780837|r 285 IVDPGEIVFRFIDLQNDKRSLRSAQVMERGIITSAYMAVKPH--GIDSTYLAWLMRSYDLCKVFYAMGSGLRQSLKFEDV 362 (426)
Q Consensus 285 ~~~~gdil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~yl~~~l~s~~~~~~~~~~~~g~~~~i~~~~l 362 (426)
......+++............ .....+++..+..+..+ .+++.||..+|+|.....++....++..++++...+
T Consensus 325 ~~~~~~~ii~~~~~~~~~~~~----~~~~~~~~~~~~~i~~~~~~~~~~~L~~~LNS~~~~~~~~~~~~~~~~~i~~~~l 400 (421)
T 2ih2_A 325 FYATPHLVVAHTKGTRVVAAW----DERAYPWREEFHLLPKEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLRML 400 (421)
T ss_dssp GGGSCEEEECSSSSSSCCEEE----ESSCCCBSSSEEEEECTTEEECHHHHHHHHTSHHHHHHHHHHHTTSSSSCCHHHH
T ss_pred HHHCCCEEEEEECCCCEEEEE----CCCCEEECCEEEEEECCCCCCCHHHHHHHHCHHHHHHHHHHHCCCCCCCCCHHHH
T ss_conf 851888999974488389998----7899897557999956998750999999975099999999865888740279999
Q ss_pred HCCEECCC
Q ss_conf 24721489
Q gi|254780837|r 363 KRLPVLVP 370 (426)
Q Consensus 363 ~~~~i~lP 370 (426)
++++||=+
T Consensus 401 ~~lPI~~~ 408 (421)
T 2ih2_A 401 ERLPVRRE 408 (421)
T ss_dssp TTCEECTT
T ss_pred HHCCCCCC
T ss_conf 86889888