Query         gi|254780837|ref|YP_003065250.1| putative restriction endonuclease S subunit [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 426
No_of_seqs    161 out of 3207
Neff          9.1 
Searched_HMMs 13730
Date          Wed Jun  1 10:30:27 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780837.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1yf2a1 d.287.1.2 (A:1-220) Bi 100.0 3.2E-33 2.4E-37  222.5  12.7  207    4-220     2-219 (220)
  2 d1yf2a2 d.287.1.2 (A:221-425)  100.0 1.3E-29 9.5E-34  200.0  11.5  187   18-211     1-201 (205)
  3 d1yf2a1 d.287.1.2 (A:1-220) Bi 100.0 9.3E-28 6.7E-32  188.5  14.7  196  214-423     5-218 (220)
  4 d1yf2a2 d.287.1.2 (A:221-425)   99.9 7.3E-27 5.3E-31  182.9  13.1  187  225-422     1-204 (205)
  5 d1ydxa2 d.287.1.2 (A:194-374)   99.9   6E-26 4.3E-30  177.2   9.0  169   18-207     1-177 (181)
  6 d1ydxa1 d.287.1.2 (A:1-193) Bi  99.9 2.7E-24   2E-28  166.9  13.0  168   20-209     8-184 (193)
  7 d1ydxa1 d.287.1.2 (A:1-193) Bi  99.8 2.2E-19 1.6E-23  136.3  15.6  170  227-419     8-186 (193)
  8 d1ydxa2 d.287.1.2 (A:194-374)   99.8 1.7E-19 1.2E-23  137.1  14.4  167  228-416     4-178 (181)
  9 d2ih2a2 d.287.1.1 (A:244-413)   54.8     4.6 0.00034   16.0   4.9   49  320-368   113-163 (170)
 10 d1tk7a1 b.72.1.1 (A:1-45) Supp  46.8     3.8 0.00027   16.6   1.5   11   18-28     10-20  (45)
 11 d1i5hw_ b.72.1.1 (W:) Ubiquiti  36.5     7.4 0.00054   14.7   1.7   13   17-29      8-20  (50)
 12 d2jmfa1 b.72.1.1 (A:521-553) U  35.4     6.6 0.00048   15.1   1.3   11   19-29      1-11  (33)
 13 d1y71a1 b.34.16.1 (A:4-127) Ki  27.8      13 0.00091   13.3   1.8   53  353-408    66-120 (124)
 14 d1zkea1 a.30.6.1 (A:1-79) Hypo  25.0      14   0.001   13.0   3.1   18  393-410    59-76  (79)

No 1  
>d1yf2a1 d.287.1.2 (A:1-220) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=100.00  E-value=3.2e-33  Score=222.45  Aligned_cols=207  Identities=22%  Similarity=0.361  Sum_probs=160.4

Q ss_pred             CCCCHHHCCCCCCCCCCCCCCCEEEECCCEEEEE-ECCCCCCC-------CCEEEEEEEEEEECCCEEEECCCCC--CCC
Q ss_conf             7788023258996237068988698841239985-06678887-------7536887000020641233112222--346
Q gi|254780837|r    4 YKAYPQYKDSGVQWIGAIPKHWKVVPIKRFTKLN-TGRTSESG-------KDIIYIGLEDVESGTGKYLPKDGNS--RQS   73 (426)
Q Consensus         4 ~~~~~~~k~s~~~w~g~iP~~We~~kL~~i~~i~-~g~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~--~~~   73 (426)
                      |.++.+||+|+   ||+||++|++++|+++|+.. .|.+|+..       .+++++++.++..+.+.........  ...
T Consensus         2 ~~~~~~~~~se---lg~iP~~W~~~~L~~i~~~i~~g~~p~~~~~~~~~~~~~p~i~~~~i~~~~~~~~~~~~~~~~~~~   78 (220)
T d1yf2a1           2 FYKEENFKKTE---IGEIPEDWEIVELKDVCKKIKAGGTPKTSVEEYYKNGTIPFVKIEDITNSNKYLTNTKIKITEEGL   78 (220)
T ss_dssp             EECCCCCBCCS---SSSCBSSCCCEEHHHHEEEEEECCCCCTTCGGGTTTCCEEEECHHHHHTSSSEECCCSEEECHHHH
T ss_pred             CCCCCCCCCCC---CCCCCCCCEEEEHHHHHEEECCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEHHHHH
T ss_conf             87767768897---886899888999489544005885899850431268988999812215532114775166514443


Q ss_pred             CCCCEEEECCCCEEEEEECCCCCEEEEECCCEEEECCEEEECCCC-CCCHHHHHHHCHHHHHHHHHHCCCCCCEEEECHH
Q ss_conf             655337842897899942287523798346489907438714666-7870222221117788988831568716665266
Q gi|254780837|r   74 DTSTVSIFAKGQILYGKLGPYLRKAIIADFDGICSTQFLVLQPKD-VLPELLQGWLLSIDVTQRIEAICEGATMSHADWK  152 (426)
Q Consensus        74 ~~~~~~~~~~gDil~s~~g~~~g~~~i~~~~~~~~~~~~vl~~~~-~~~~fl~y~l~s~~~~~~~~~~~~Gs~~~~i~~~  152 (426)
                      .....+.++.||||++++|+. |.+++.+.+++++.+++++++.+ ..+.|++||+.+. ...+....+.|+++++|+.+
T Consensus        79 ~~~~~~~~~~gdil~~~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~g~~~~~i~~~  156 (220)
T d1yf2a1          79 NNSNAWIVPKNSVLFAMYGSI-GETAINKIEVATNQAILGIIPKDNILESEFLYYILAK-NKNYYSKLGMQTTQKNLNAQ  156 (220)
T ss_dssp             HTSSCCCBCTTCEEEECSSST-TCEEEESSCBEECSSEEEEEECTTTCCHHHHHHHHHH-THHHHHCCSSSSSCCCCCHH
T ss_pred             HHHHEEEECCCCCCCHHHCCC-HHHHHHCCCCEECCCEEEEECCCCCCHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCHH
T ss_conf             210005504433310110100-1222202331021313798326432125666666401-35788875245551214565


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf             63445554433234577999999999988877654333222236889999999986078810002357
Q gi|254780837|r  153 GIGNIPMPIPPLAEQVLIREKIIAETVRIDTLITERIRFIELLKEKKQALVSYIVTKGLNPDVKMKDS  220 (426)
Q Consensus       153 ~l~~~~iplPpl~eQ~kIv~~Ld~~~~~Id~~I~~~~~~i~~l~e~kqali~~~~tk~L~p~~~~k~s  220 (426)
                      +|+++.||+||++||++||++|+    .+|++++.+++.++.|+++|+++++++||++|+ ..+++++
T Consensus       157 ~l~~~~i~iPp~~eQ~~I~~~l~----~i~~~i~~~~~~i~~L~~~r~~ll~~l~tg~l~-~~r~~~~  219 (220)
T d1yf2a1         157 IVKSFKIPLPPLEEQKQIAKILT----KIDEGIEIIEKSINKLERIKKGLMHKLLTKGIG-HSRFKKS  219 (220)
T ss_dssp             HHHTCEECCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS-CCCEECC
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCC
T ss_conf             54324652245899999999999----999999999999999999999999998579999-8108999


No 2  
>d1yf2a2 d.287.1.2 (A:221-425) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=99.96  E-value=1.3e-29  Score=200.01  Aligned_cols=187  Identities=22%  Similarity=0.325  Sum_probs=111.0

Q ss_pred             CCCCCCCCEEEECCCEEEEEECCCCCCCC-------CEEEEEEEEEEECCCEE-EECCC---CCCCCCCCCEEEECCCCE
Q ss_conf             37068988698841239985066788877-------53688700002064123-31122---223466553378428978
Q gi|254780837|r   18 IGAIPKHWKVVPIKRFTKLNTGRTSESGK-------DIIYIGLEDVESGTGKY-LPKDG---NSRQSDTSTVSIFAKGQI   86 (426)
Q Consensus        18 ~g~iP~~We~~kL~~i~~i~~g~~~~~~~-------~~~~~~~~~i~~~~~~~-~~~~~---~~~~~~~~~~~~~~~gDi   86 (426)
                      ||+||++|++++|+++|++.+|.+++..+       +++++++.++....... .....   ..........+.+..||+
T Consensus         1 lG~iP~~W~~~~L~di~~~~~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   80 (205)
T d1yf2a2           1 IGEIPEDWEVFEIKDIFEVKTGTTPSTKKSEYWENGEINWITPLDLSRLNEKIYIGSSERKVTKIALEKCNLNLIPKGSI   80 (205)
T ss_dssp             TSSEETTCEEEEHHHHEEEEECCCCCTTCGGGTTTCCEEEECHHHHHTTTTCSEECCCSSEECHHHHHHTTCCCBCTTCE
T ss_pred             CCCCCCCCEEEEHHHEEEEECCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEHHCCCCCEECCCCCE
T ss_conf             97719797899925769995888899775101257963589851246656313604652343210102444222144436


Q ss_pred             EEEEECCCCCEEEEECCCEEEECCEEEECC--C-CCCCHHHHHHHCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHHH
Q ss_conf             999422875237983464899074387146--6-6787022222111778898883156871666526663445554433
Q gi|254780837|r   87 LYGKLGPYLRKAIIADFDGICSTQFLVLQP--K-DVLPELLQGWLLSIDVTQRIEAICEGATMSHADWKGIGNIPMPIPP  163 (426)
Q Consensus        87 l~s~~g~~~g~~~i~~~~~~~~~~~~vl~~--~-~~~~~fl~y~l~s~~~~~~~~~~~~Gs~~~~i~~~~l~~~~iplPp  163 (426)
                      +++..|+.| .+.+...+..+.....+++.  + ...+.|++|++  ..++.++...++|+++++|+.++++++.||+||
T Consensus        81 ~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~g~~~~~i~~~~l~~~~i~lP~  157 (205)
T d1yf2a2          81 IISTRAPVG-YVAVLTVESTFNQGCKGLFQKNNDSVNTEFYAYYL--KFKKNLLENLSGGSTFKELSKSMLENFKIPLPP  157 (205)
T ss_dssp             EEECSSSTT-CEEEESSCBEECTTEEEEEESCTTSCCHHHHHHHH--HHTHHHHHHHHCSSSSCCCCHHHHHHCEEEECC
T ss_pred             EEEECCCEE-EEEEECCCCCEEECHHEECCCCCCCCCHHHHHHHH--HHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCC
T ss_conf             653035237-89996156505200010102442344699999988--888899987616744344448888518455799


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Q ss_conf             234577999999999988877654333222236889999999986078
Q gi|254780837|r  164 LAEQVLIREKIIAETVRIDTLITERIRFIELLKEKKQALVSYIVTKGL  211 (426)
Q Consensus       164 l~eQ~kIv~~Ld~~~~~Id~~I~~~~~~i~~l~e~kqali~~~~tk~L  211 (426)
                      ++||++||++|+    .+|++|+..+++++.|+++|+++|+++||+++
T Consensus       158 ~~eQ~~I~~~l~----~id~~i~~~~~~~~~l~~~k~~Ll~~l~tGel  201 (205)
T d1yf2a2         158 LEEQKQIAKILS----SVDKSIELKKQKKEKLQRMKKKIMELLLTGKV  201 (205)
T ss_dssp             HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSC
T ss_pred             HHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf             999999999999----99999999999999999999999999837844


No 3  
>d1yf2a1 d.287.1.2 (A:1-220) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=99.95  E-value=9.3e-28  Score=188.49  Aligned_cols=196  Identities=16%  Similarity=0.303  Sum_probs=140.0

Q ss_pred             CCCCCCCCHHCCCCCCCCCCCCCHHHHCCCCCCCC------CC-CCCCEEEEECCCCCCCCCCCCCC---CEEC--CCCC
Q ss_conf             00023575000686866564330243101345676------44-44321577404553246532212---1000--4433
Q gi|254780837|r  214 DVKMKDSGIEWVGLVPDHWEVKPFFALVTELNRKN------TK-LIESNILSLSYGNIIQKLETRNM---GLKP--ESYE  281 (426)
Q Consensus       214 ~~~~k~s~~e~lG~IP~~W~~~~l~~~~~~~~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~  281 (426)
                      ...||||+   ||+||++|++++|++++....++.      .. +.++++++++.+++.........   ....  ....
T Consensus         5 ~~~~~~se---lg~iP~~W~~~~L~~i~~~i~~g~~p~~~~~~~~~~~~~p~i~~~~i~~~~~~~~~~~~~~~~~~~~~~   81 (220)
T d1yf2a1           5 EENFKKTE---IGEIPEDWEIVELKDVCKKIKAGGTPKTSVEEYYKNGTIPFVKIEDITNSNKYLTNTKIKITEEGLNNS   81 (220)
T ss_dssp             CCCCBCCS---SSSCBSSCCCEEHHHHEEEEEECCCCCTTCGGGTTTCCEEEECHHHHHTSSSEECCCSEEECHHHHHTS
T ss_pred             CCCCCCCC---CCCCCCCCEEEEHHHHHEEECCCCCCCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEHHHHHHHH
T ss_conf             67768897---886899888999489544005885899850431268988999812215532114775166514443210


Q ss_pred             CCEEECCCCEEEEEECCCCCEEEEEEECCCCCEEEECHHEECCCC-C-CCHHHHHHHHHCHHHHHHHHH-HCCCEEEEEC
Q ss_conf             202422884899742166403799950235660774111430577-6-886889999709899999986-2584041002
Q gi|254780837|r  282 TYQIVDPGEIVFRFIDLQNDKRSLRSAQVMERGIITSAYMAVKPH-G-IDSTYLAWLMRSYDLCKVFYA-MGSGLRQSLK  358 (426)
Q Consensus       282 ~~~~~~~gdil~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~yl~~~l~s~~~~~~~~~-~~~g~~~~i~  358 (426)
                      ....++.||++++..++.+.. ++.    ...+++++++..+++. . +++.|+|+++.+..+  .... ..++++++|+
T Consensus        82 ~~~~~~~gdil~~~~~~~g~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~g~~~~~i~  154 (220)
T d1yf2a1          82 NAWIVPKNSVLFAMYGSIGET-AIN----KIEVATNQAILGIIPKDNILESEFLYYILAKNKN--YYSKLGMQTTQKNLN  154 (220)
T ss_dssp             SCCCBCTTCEEEECSSSTTCE-EEE----SSCBEECSSEEEEEECTTTCCHHHHHHHHHHTHH--HHHCCSSSSSCCCCC
T ss_pred             HEEEECCCCCCCHHHCCCHHH-HHH----CCCCEECCCEEEEECCCCCCHHHHHHHHHHHHHH--HHHHHCCCCCCCCCC
T ss_conf             005504433310110100122-220----2331021313798326432125666666401357--888752455512145


Q ss_pred             HHHHHCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---CEEECCC
Q ss_conf             8898247214898899999999999999999999999999999999999997788622---3361487
Q gi|254780837|r  359 FEDVKRLPVLVPPIKEQFDITNVINVETARIDVLVEKIEQSIVLLKERRSSFIAAAVT---GQIDLRG  423 (426)
Q Consensus       359 ~~~l~~~~i~lP~leeQ~~I~~~l~~~~~~id~li~~~~~~i~~L~~lk~sLl~~a~t---Gki~V~~  423 (426)
                      .+++++++||+||++||++|+++|+    .++.+++..+++++.|+++|++||++|||   |++||++
T Consensus       155 ~~~l~~~~i~iPp~~eQ~~I~~~l~----~i~~~i~~~~~~i~~L~~~r~~ll~~l~tg~l~~~r~~~  218 (220)
T d1yf2a1         155 AQIVKSFKIPLPPLEEQKQIAKILT----KIDEGIEIIEKSINKLERIKKGLMHKLLTKGIGHSRFKK  218 (220)
T ss_dssp             HHHHHTCEECCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCCCEEC
T ss_pred             HHHHHCCCCCCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
T ss_conf             6554324652245899999999999----999999999999999999999999998579999810899


No 4  
>d1yf2a2 d.287.1.2 (A:221-425) Bipartite methylase S protein MJ0130 {Methanocaldococcus jannaschii [TaxId: 2190]}
Probab=99.94  E-value=7.3e-27  Score=182.90  Aligned_cols=187  Identities=13%  Similarity=0.238  Sum_probs=130.8

Q ss_pred             CCCCCCCCCCCCHHHHCCCCCCC-----CCC-CCCCEEEEECCCCCCCCCCCC----CCC-EEC--CCCCCCEEECCCCE
Q ss_conf             68686656433024310134567-----644-443215774045532465322----121-000--44332024228848
Q gi|254780837|r  225 VGLVPDHWEVKPFFALVTELNRK-----NTK-LIESNILSLSYGNIIQKLETR----NMG-LKP--ESYETYQIVDPGEI  291 (426)
Q Consensus       225 lG~IP~~W~~~~l~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~~~~~----~~~-~~~--~~~~~~~~~~~gdi  291 (426)
                      ||+||++|++++|++++...++.     ..+ ..++++++++..++.......    ... ...  ........+..||+
T Consensus         1 lG~iP~~W~~~~L~di~~~~~G~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i   80 (205)
T d1yf2a2           1 IGEIPEDWEVFEIKDIFEVKTGTTPSTKKSEYWENGEINWITPLDLSRLNEKIYIGSSERKVTKIALEKCNLNLIPKGSI   80 (205)
T ss_dssp             TSSEETTCEEEEHHHHEEEEECCCCCTTCGGGTTTCCEEEECHHHHHTTTTCSEECCCSSEECHHHHHHTTCCCBCTTCE
T ss_pred             CCCCCCCCEEEEHHHEEEEECCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCEEECCCCEEEEEEHHCCCCCEECCCCCE
T ss_conf             97719797899925769995888899775101257963589851246656313604652343210102444222144436


Q ss_pred             EEEEECCCCCEEEEEEECCCCCEEEECHHEEC--CC-CCCCHHHHHHHHHCHHHHHHHHHH-CCCEEEEECHHHHHCCEE
Q ss_conf             99742166403799950235660774111430--57-768868899997098999999862-584041002889824721
Q gi|254780837|r  292 VFRFIDLQNDKRSLRSAQVMERGIITSAYMAV--KP-HGIDSTYLAWLMRSYDLCKVFYAM-GSGLRQSLKFEDVKRLPV  367 (426)
Q Consensus       292 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~~yl~~~l~s~~~~~~~~~~-~~g~~~~i~~~~l~~~~i  367 (426)
                      +++..+..+. .+..    ..+..++.+...+  +. ..+++.|+||++.+.  ..++... +++++++|+.+++++++|
T Consensus        81 ~~~~~~~~g~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~~~i~~~~l~~~~i  153 (205)
T d1yf2a2          81 IISTRAPVGY-VAVL----TVESTFNQGCKGLFQKNNDSVNTEFYAYYLKFK--KNLLENLSGGSTFKELSKSMLENFKI  153 (205)
T ss_dssp             EEECSSSTTC-EEEE----SSCBEECTTEEEEEESCTTSCCHHHHHHHHHHT--HHHHHHHHCSSSSCCCCHHHHHHCEE
T ss_pred             EEEECCCEEE-EEEE----CCCCCEEECHHEECCCCCCCCCHHHHHHHHHHH--HHHHHHHCCCCCCCCCCHHHHHCCCC
T ss_conf             6530352378-9996----156505200010102442344699999988888--89998761674434444888851845


Q ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECC
Q ss_conf             4898899999999999999999999999999999999999997788622336148
Q gi|254780837|r  368 LVPPIKEQFDITNVINVETARIDVLVEKIEQSIVLLKERRSSFIAAAVTGQIDLR  422 (426)
Q Consensus       368 ~lP~leeQ~~I~~~l~~~~~~id~li~~~~~~i~~L~~lk~sLl~~a~tGki~V~  422 (426)
                      |+||++||++|+++|+    .+|++|+..+++++.|+++|++||++|||||+|||
T Consensus       154 ~lP~~~eQ~~I~~~l~----~id~~i~~~~~~~~~l~~~k~~Ll~~l~tGel~v~  204 (205)
T d1yf2a2         154 PLPPLEEQKQIAKILS----SVDKSIELKKQKKEKLQRMKKKIMELLLTGKVRVK  204 (205)
T ss_dssp             EECCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCEEC
T ss_pred             CCCCHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEC
T ss_conf             5799999999999999----99999999999999999999999999837844525


No 5  
>d1ydxa2 d.287.1.2 (A:194-374) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=99.92  E-value=6e-26  Score=177.23  Aligned_cols=169  Identities=13%  Similarity=0.132  Sum_probs=135.5

Q ss_pred             CCCCCCCCEEEECCCEEEEEECCCCCCCC-----CEEEEEEEEEEECCCEEEECCCCCCCCCCCCEEEECCCCEEEEEEC
Q ss_conf             37068988698841239985066788877-----5368870000206412331122223466553378428978999422
Q gi|254780837|r   18 IGAIPKHWKVVPIKRFTKLNTGRTSESGK-----DIIYIGLEDVESGTGKYLPKDGNSRQSDTSTVSIFAKGQILYGKLG   92 (426)
Q Consensus        18 ~g~iP~~We~~kL~~i~~i~~g~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~gDil~s~~g   92 (426)
                      |..+|++|+.++|||+|++.+|+++++.+     .+++++..+..               .+....+....+++++++.|
T Consensus         1 ~~~~~~~w~~v~Lgdi~~~~~G~~~~~~~~~~~G~~p~i~~~~~~---------------~~~~~~~~~~~~~i~i~~~g   65 (181)
T d1ydxa2           1 LEALQSQMHEITLGEIFNFKSGKYLKSEERLEEGKFPYYGAGIDN---------------TGFVAEPNTEKDTISIISNG   65 (181)
T ss_dssp             CTHHHHHCEEEEGGGTEEEEECCCCCGGGCBSSCSEEEESSSSSC---------------SSEESSCSBCSSEEEEECSS
T ss_pred             CCCCCCCEEEEEHHHEEEEECCCCCCHHHHCCCCCEEEEEECCCC---------------CCEEEEEECCCCCEEEEECC
T ss_conf             977258638999445899948998874440368886899813404---------------20355301026745998447


Q ss_pred             CCCCEEEEECCCEEEECCEEEECCC--CCCCHHHHHHHCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHH-HHHHHHHH
Q ss_conf             8752379834648990743871466--67870222221117788988831568716665266634455544-33234577
Q gi|254780837|r   93 PYLRKAIIADFDGICSTQFLVLQPK--DVLPELLQGWLLSIDVTQRIEAICEGATMSHADWKGIGNIPMPI-PPLAEQVL  169 (426)
Q Consensus        93 ~~~g~~~i~~~~~~~~~~~~vl~~~--~~~~~fl~y~l~s~~~~~~~~~~~~Gs~~~~i~~~~l~~~~ipl-Ppl~eQ~k  169 (426)
                      +.+|.+.+....+.++.+.+++++.  ++++.|++|||.+  +..++...++|+++++++..+++++.+|+ ||++||++
T Consensus        66 ~~ig~~~~~~~~~~~~~~~~~~~~~~~~i~~~fl~y~l~~--~~~~~~~~~~g~~~~~~~~~~l~~~~i~~~P~l~eQ~~  143 (181)
T d1ydxa2          66 YSLGNIRYHEIPWFNGTGSIALEPMNNEIYVPFFYCALKY--LQKDIKERMKSDDSPFLSLKLAGEIKVPYVKSFQLQRK  143 (181)
T ss_dssp             TTTTCEEEESSCBEECTTEEEEEESSTTCCHHHHHHHHHH--HHHHHHHHHHHHTSCCCCHHHHHTCEEEECSCHHHHHH
T ss_pred             CCCCCEEEECCCCCCCCCEEEEECCCCCCCHHHHHHHHHH--HHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHH
T ss_conf             6456325644664302635886146765468899998888--88888875257742350588998765301688999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             99999999998887765433322223688999999998
Q gi|254780837|r  170 IREKIIAETVRIDTLITERIRFIELLKEKKQALVSYIV  207 (426)
Q Consensus       170 Iv~~Ld~~~~~Id~~I~~~~~~i~~l~e~kqali~~~~  207 (426)
                      ||++|+    .+|++|+.+++.++.|+++|+++++++|
T Consensus       144 I~~~l~----~~d~~i~~~~~~i~~l~~lk~~Ll~~lF  177 (181)
T d1ydxa2         144 AGKIVF----LLDQKLDQYKKELSSLTVIRDTLLKKLF  177 (181)
T ss_dssp             HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred             HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf             999999----9999999999999999999999999971


No 6  
>d1ydxa1 d.287.1.2 (A:1-193) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=99.91  E-value=2.7e-24  Score=166.92  Aligned_cols=168  Identities=17%  Similarity=0.160  Sum_probs=124.7

Q ss_pred             CCCCCCEEEECCCEEEEEECCCCCCCC-----CEEEEEEEEEEECCCEEEECCCCCCCCCCCCEEEECCCCEEEEEECCC
Q ss_conf             068988698841239985066788877-----536887000020641233112222346655337842897899942287
Q gi|254780837|r   20 AIPKHWKVVPIKRFTKLNTGRTSESGK-----DIIYIGLEDVESGTGKYLPKDGNSRQSDTSTVSIFAKGQILYGKLGPY   94 (426)
Q Consensus        20 ~iP~~We~~kL~~i~~i~~g~~~~~~~-----~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~gDil~s~~g~~   94 (426)
                      ..|++|++++||++|++.+|.++++..     .+++++...               ........+.+..+|++++..|++
T Consensus         8 ~~~~~W~~~~Lg~i~~i~~G~~~~~~~~~~~g~~p~~~~~~---------------~~~~~~~~~~~~~~~il~~~~g~~   72 (193)
T d1ydxa1           8 NNNINWTKRTIDSLFDLKKGEMLEKELITPEGKYEYFNGGV---------------KNSGRTDKFNTFKNTISVIVGGSC   72 (193)
T ss_dssp             SSSCCCEEEEHHHHEEEEECCCCCGGGCCTTCSEEEESSSS---------------SCSCEESCCCBCSSCEEEECBSST
T ss_pred             CCCCCCEEEEEEEEEEEECCCCCCHHHCCCCCCEEEEEEEC---------------CCCCEEEEEEECCCCEEEEECCCC
T ss_conf             99999899993179999589889864504578768997300---------------003236677531771799832654


Q ss_pred             CCEEEEECCCEEEECCEEEEC--CC-CCCCHHHHHHHCHHHHHHHHHHCCCCCCEEEECHHHHHHHHHHHH-HHHHHHHH
Q ss_conf             523798346489907438714--66-678702222211177889888315687166652666344555443-32345779
Q gi|254780837|r   95 LRKAIIADFDGICSTQFLVLQ--PK-DVLPELLQGWLLSIDVTQRIEAICEGATMSHADWKGIGNIPMPIP-PLAEQVLI  170 (426)
Q Consensus        95 ~g~~~i~~~~~~~~~~~~vl~--~~-~~~~~fl~y~l~s~~~~~~~~~~~~Gs~~~~i~~~~l~~~~iplP-pl~eQ~kI  170 (426)
                      |..+ +......++.+..+++  .+ .+++.|++|++.  .+..++...++|+++++|+.++++++.||+| |++||++|
T Consensus        73 g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~--~~~~~~~~~~~gs~~~~i~~~~i~~~~i~lpP~~~eQ~~I  149 (193)
T d1ydxa1          73 GYVR-LADKNFFCGQSNCTLNLLDPLELDLKFAYYALK--SQQERIEALAFGTTIQNIRISDLKELEIPFTSNKNEQHAI  149 (193)
T ss_dssp             TCEE-ECSSCBEECTTEEEEEESCTTTSCHHHHHHHHH--TTHHHHHTTCBCSSSCBCCHHHHHHCEEEECCCHHHHHHH
T ss_pred             CCEE-EECCCCCCCCCEEEEEECCCCCCCHHHHHHHHH--HHHHHHHHHHCCCCCCEECHHHHHHHHHHHCCCHHHHHHH
T ss_conf             5214-304432013643799966833246899876666--6899988750577553421988988776652269999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             999999999888776543332222368899999999860
Q gi|254780837|r  171 REKIIAETVRIDTLITERIRFIELLKEKKQALVSYIVTK  209 (426)
Q Consensus       171 v~~Ld~~~~~Id~~I~~~~~~i~~l~e~kqali~~~~tk  209 (426)
                      |++|+.    +|++|+.+++.++.|+++++++++++|+.
T Consensus       150 ~~~l~~----ld~~i~~~~~~i~~l~~~~~~ll~~lft~  184 (193)
T d1ydxa1         150 ANTLSV----FDERLENLASLIEINRKLRDEYAHKLFSL  184 (193)
T ss_dssp             HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred             HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf             999999----99999999999999999999999998766


No 7  
>d1ydxa1 d.287.1.2 (A:1-193) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=99.82  E-value=2.2e-19  Score=136.35  Aligned_cols=170  Identities=14%  Similarity=0.079  Sum_probs=115.6

Q ss_pred             CCCCCCCCCCHHHHCCCCCCCC---CCCC-CCEEEEECCCCCCCCCCCCCCCEECCCCCCCEEECCCCEEEEEECCCCCE
Q ss_conf             6866564330243101345676---4444-32157740455324653221210004433202422884899742166403
Q gi|254780837|r  227 LVPDHWEVKPFFALVTELNRKN---TKLI-ESNILSLSYGNIIQKLETRNMGLKPESYETYQIVDPGEIVFRFIDLQNDK  302 (426)
Q Consensus       227 ~IP~~W~~~~l~~~~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdil~~~~~~~~~~  302 (426)
                      .+|.+|++++|++++....+..   ..+. ++.+|++..++.....            ........+|++++..+..+..
T Consensus         8 ~~~~~W~~~~Lg~i~~i~~G~~~~~~~~~~~g~~p~~~~~~~~~~~------------~~~~~~~~~~il~~~~g~~g~~   75 (193)
T d1ydxa1           8 NNNINWTKRTIDSLFDLKKGEMLEKELITPEGKYEYFNGGVKNSGR------------TDKFNTFKNTISVIVGGSCGYV   75 (193)
T ss_dssp             SSSCCCEEEEHHHHEEEEECCCCCGGGCCTTCSEEEESSSSSCSCE------------ESCCCBCSSCEEEECBSSTTCE
T ss_pred             CCCCCCEEEEEEEEEEEECCCCCCHHHCCCCCCEEEEEEECCCCCE------------EEEEEECCCCEEEEECCCCCCE
T ss_conf             9999989999317999958988986450457876899730000323------------6677531771799832654521


Q ss_pred             EEEEEECCCCCEEEECH--HEECCC-CCCCHHHHHHHHHCHHHHHHHHHHCC-CEEEEECHHHHHCCEECCC-CHHHHHH
Q ss_conf             79995023566077411--143057-76886889999709899999986258-4041002889824721489-8899999
Q gi|254780837|r  303 RSLRSAQVMERGIITSA--YMAVKP-HGIDSTYLAWLMRSYDLCKVFYAMGS-GLRQSLKFEDVKRLPVLVP-PIKEQFD  377 (426)
Q Consensus       303 ~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~yl~~~l~s~~~~~~~~~~~~-g~~~~i~~~~l~~~~i~lP-~leeQ~~  377 (426)
                      + ..    .....++.+  ++.+.+ ..+++.|+||++...  ...+...++ +++++|+.++++++.||+| +++||++
T Consensus        76 ~-~~----~~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~--~~~~~~~~~gs~~~~i~~~~i~~~~i~lpP~~~eQ~~  148 (193)
T d1ydxa1          76 R-LA----DKNFFCGQSNCTLNLLDPLELDLKFAYYALKSQ--QERIEALAFGTTIQNIRISDLKELEIPFTSNKNEQHA  148 (193)
T ss_dssp             E-EC----SSCBEECTTEEEEEESCTTTSCHHHHHHHHHTT--HHHHHTTCBCSSSCBCCHHHHHHCEEEECCCHHHHHH
T ss_pred             E-EE----CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHH--HHHHHHHHCCCCCCEECHHHHHHHHHHHCCCHHHHHH
T ss_conf             4-30----443201364379996683324689987666668--9998875057755342198898877665226999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEE
Q ss_conf             999999999999999999999999999999997788622336
Q gi|254780837|r  378 ITNVINVETARIDVLVEKIEQSIVLLKERRSSFIAAAVTGQI  419 (426)
Q Consensus       378 I~~~l~~~~~~id~li~~~~~~i~~L~~lk~sLl~~a~tGki  419 (426)
                      |+++|+.    +|++|+.++++++.|+++|++||+++||++-
T Consensus       149 I~~~l~~----ld~~i~~~~~~i~~l~~~~~~ll~~lft~~~  186 (193)
T d1ydxa1         149 IANTLSV----FDERLENLASLIEINRKLRDEYAHKLFSLDE  186 (193)
T ss_dssp             HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH
T ss_pred             HHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
T ss_conf             9999999----9999999999999999999999999876682


No 8  
>d1ydxa2 d.287.1.2 (A:194-374) Bipartite methylase S protein MG438 {Mycoplasma genitalium [TaxId: 2097]}
Probab=99.82  E-value=1.7e-19  Score=137.11  Aligned_cols=167  Identities=10%  Similarity=0.038  Sum_probs=118.0

Q ss_pred             CCCCCCCCCHHHHCCCCCCC---CCCCC-CCEEEEECCCCCCCCCCCCCCCEECCCCCCCEEECCCCEEEEEECCCCCEE
Q ss_conf             86656433024310134567---64444-321577404553246532212100044332024228848997421664037
Q gi|254780837|r  228 VPDHWEVKPFFALVTELNRK---NTKLI-ESNILSLSYGNIIQKLETRNMGLKPESYETYQIVDPGEIVFRFIDLQNDKR  303 (426)
Q Consensus       228 IP~~W~~~~l~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gdil~~~~~~~~~~~  303 (426)
                      +|.+|+.++|+++++..+++   +.++. ++.+|+++.++......            .......+++++...+...+..
T Consensus         4 ~~~~w~~v~Lgdi~~~~~G~~~~~~~~~~~G~~p~i~~~~~~~~~~------------~~~~~~~~~i~i~~~g~~ig~~   71 (181)
T d1ydxa2           4 LQSQMHEITLGEIFNFKSGKYLKSEERLEEGKFPYYGAGIDNTGFV------------AEPNTEKDTISIISNGYSLGNI   71 (181)
T ss_dssp             HHHHCEEEEGGGTEEEEECCCCCGGGCBSSCSEEEESSSSSCSSEE------------SSCSBCSSEEEEECSSTTTTCE
T ss_pred             CCCCEEEEEHHHEEEEECCCCCCHHHHCCCCCEEEEEECCCCCCEE------------EEEECCCCCEEEEECCCCCCCE
T ss_conf             2586389994458999489988744403688868998134042035------------5301026745998447645632


Q ss_pred             EEEEECCCCCEEEECHHEECCC--CCCCHHHHHHHHHCHHHHHHHHH-HCCCEEEEECHHHHHCCEECC-CCHHHHHHHH
Q ss_conf             9995023566077411143057--76886889999709899999986-258404100288982472148-9889999999
Q gi|254780837|r  304 SLRSAQVMERGIITSAYMAVKP--HGIDSTYLAWLMRSYDLCKVFYA-MGSGLRQSLKFEDVKRLPVLV-PPIKEQFDIT  379 (426)
Q Consensus       304 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~yl~~~l~s~~~~~~~~~-~~~g~~~~i~~~~l~~~~i~l-P~leeQ~~I~  379 (426)
                      ...    ...+.++.+.+++++  +.+++.|++|+|++..  .++.. ..++++++++..+++++.+|+ ||++||++|+
T Consensus        72 ~~~----~~~~~~~~~~~~~~~~~~~i~~~fl~y~l~~~~--~~~~~~~~g~~~~~~~~~~l~~~~i~~~P~l~eQ~~I~  145 (181)
T d1ydxa2          72 RYH----EIPWFNGTGSIALEPMNNEIYVPFFYCALKYLQ--KDIKERMKSDDSPFLSLKLAGEIKVPYVKSFQLQRKAG  145 (181)
T ss_dssp             EEE----SSCBEECTTEEEEEESSTTCCHHHHHHHHHHHH--HHHHHHHHHHTSCCCCHHHHHTCEEEECSCHHHHHHHH
T ss_pred             EEE----CCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHH--HHHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHH
T ss_conf             564----466430263588614676546889999888888--88887525774235058899876530168899999999


Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             9999999999999999999999999999997788622
Q gi|254780837|r  380 NVINVETARIDVLVEKIEQSIVLLKERRSSFIAAAVT  416 (426)
Q Consensus       380 ~~l~~~~~~id~li~~~~~~i~~L~~lk~sLl~~a~t  416 (426)
                      ++++    .+|++|+..+++++.|+++|++||+++|.
T Consensus       146 ~~l~----~~d~~i~~~~~~i~~l~~lk~~Ll~~lF~  178 (181)
T d1ydxa2         146 KIVF----LLDQKLDQYKKELSSLTVIRDTLLKKLFP  178 (181)
T ss_dssp             HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred             HHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf             9999----99999999999999999999999999716


No 9  
>d2ih2a2 d.287.1.1 (A:244-413) DNA methylase TaqI, C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=54.82  E-value=4.6  Score=16.01  Aligned_cols=49  Identities=18%  Similarity=0.246  Sum_probs=36.7

Q ss_pred             HEECCCC--CCCHHHHHHHHHCHHHHHHHHHHCCCEEEEECHHHHHCCEEC
Q ss_conf             1430577--688688999970989999998625840410028898247214
Q gi|254780837|r  320 YMAVKPH--GIDSTYLAWLMRSYDLCKVFYAMGSGLRQSLKFEDVKRLPVL  368 (426)
Q Consensus       320 ~~~~~~~--~~~~~yl~~~l~s~~~~~~~~~~~~g~~~~i~~~~l~~~~i~  368 (426)
                      +..+...  .++.+.+.-+|+|...+.++...=.-..++|+...|+.++++
T Consensus       113 fHLlpKe~vdl~~~eVV~~LNSe~iqryvk~lyRd~~~HLti~qL~~lPv~  163 (170)
T d2ih2a2         113 FHLLPKEGVRLDPSSLVQWLNSEAMQKHVRTLYRDFVPHLTLRMLERLPVR  163 (170)
T ss_dssp             EEEEECTTEEECHHHHHHHHTSHHHHHHHHHHHTTSSSSCCHHHHTTCEEC
T ss_pred             EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf             221221367868999999971799999999999863455329998548885


No 10 
>d1tk7a1 b.72.1.1 (A:1-45) Suppressor of deltex (Cg4244-pb) {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=46.84  E-value=3.8  Score=16.58  Aligned_cols=11  Identities=27%  Similarity=0.945  Sum_probs=6.1

Q ss_pred             CCCCCCCCEEE
Q ss_conf             37068988698
Q gi|254780837|r   18 IGAIPKHWKVV   28 (426)
Q Consensus        18 ~g~iP~~We~~   28 (426)
                      +|+||.||+..
T Consensus        10 ~gpLP~GWe~~   20 (45)
T d1tk7a1          10 LGPLPDGWEKK   20 (45)
T ss_dssp             TSSSSSSCCEE
T ss_pred             CCCCCCCCEEE
T ss_conf             79899994587


No 11 
>d1i5hw_ b.72.1.1 (W:) Ubiquitin ligase NEDD4 WWIII domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=36.48  E-value=7.4  Score=14.73  Aligned_cols=13  Identities=23%  Similarity=0.629  Sum_probs=7.2

Q ss_pred             CCCCCCCCCEEEE
Q ss_conf             2370689886988
Q gi|254780837|r   17 WIGAIPKHWKVVP   29 (426)
Q Consensus        17 w~g~iP~~We~~k   29 (426)
                      .+|+||.||+...
T Consensus         8 ~~~pLP~gWe~~~   20 (50)
T d1i5hw_           8 DLGPLPPGWEERT   20 (50)
T ss_dssp             CCSSCSTTEEEEE
T ss_pred             CCCCCCCCCEEEE
T ss_conf             7798997845878


No 12 
>d2jmfa1 b.72.1.1 (A:521-553) Ubiquitin ligase NEDD4 WWIII domain {fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=35.39  E-value=6.6  Score=15.07  Aligned_cols=11  Identities=27%  Similarity=0.869  Sum_probs=6.2

Q ss_pred             CCCCCCCEEEE
Q ss_conf             70689886988
Q gi|254780837|r   19 GAIPKHWKVVP   29 (426)
Q Consensus        19 g~iP~~We~~k   29 (426)
                      |.||.|||...
T Consensus         1 GpLP~GWe~~~   11 (33)
T d2jmfa1           1 GPLPPGWEIRY   11 (33)
T ss_dssp             SCCCTTEEEEE
T ss_pred             CCCCCCEEEEE
T ss_conf             93598801889


No 13 
>d1y71a1 b.34.16.1 (A:4-127) Kinase-associated protein B {Bacillus cereus [TaxId: 1396]}
Probab=27.83  E-value=13  Score=13.33  Aligned_cols=53  Identities=15%  Similarity=0.142  Sum_probs=28.1

Q ss_pred             EEEEECHHHHHCCEECCCCHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf             0410028898247214898899--9999999999999999999999999999999999
Q gi|254780837|r  353 LRQSLKFEDVKRLPVLVPPIKE--QFDITNVINVETARIDVLVEKIEQSIVLLKERRS  408 (426)
Q Consensus       353 ~~~~i~~~~l~~~~i~lP~lee--Q~~I~~~l~~~~~~id~li~~~~~~i~~L~~lk~  408 (426)
                      -+.++....++.+.--+|+.++  |+.+....+.+.+   .--+-.++.++.|++|++
T Consensus        66 Ek~~ip~~~vk~y~geipdY~~SLq~A~~~~~~~L~~---~~s~~a~~sL~~L~~Lkk  120 (124)
T d1y71a1          66 EQTNIPEQMVKKYEGEIPDYTESLKLALETQMNSFSE---DDSPFAERSLETLQQLKK  120 (124)
T ss_dssp             CEEEEEGGGEEECCSCCCCHHHHHHHHHHHHHHTTTT---CCSHHHHHHHHHHHHHHH
T ss_pred             HHHCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHH
T ss_conf             7753988766106788899799999999999999750---175999999999999988


No 14 
>d1zkea1 a.30.6.1 (A:1-79) Hypothetical protein HP1531 {Helicobacter pylori [TaxId: 210]}
Probab=24.99  E-value=14  Score=13.01  Aligned_cols=18  Identities=22%  Similarity=0.421  Sum_probs=6.6

Q ss_pred             HHHHHHHHHHHHHHHHHH
Q ss_conf             999999999999999997
Q gi|254780837|r  393 VEKIEQSIVLLKERRSSF  410 (426)
Q Consensus       393 i~~~~~~i~~L~~lk~sL  410 (426)
                      +++..++|+.|+.+|+.+
T Consensus        59 v~kLK~~IdaLNKiKke~   76 (79)
T d1zkea1          59 VERLKELINALNKIKKGL   76 (79)
T ss_dssp             HHHHHHHHHHHHHHHGGG
T ss_pred             HHHHHHHHHHHHHHHHHH
T ss_conf             999999999999998888


Done!