BLAST/PSIBLAST alignment of GI: 254780837 and GI: 120601537 at iteration 1
>gi|120601537|ref|YP_965937.1| restriction modification system DNA specificity subunit [Desulfovibrio vulgaris DP4] Length = 438
>gi|120561766|gb|ABM27510.1| restriction modification system DNA specificity domain [Desulfovibrio vulgaris DP4] Length = 438
Score = 230 bits (586), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 145/199 (72%)
Query: 218 KDSGIEWVGLVPDHWEVKPFFALVTELNRKNTKLIESNILSLSYGNIIQKLETRNMGLKP 277
KDSG+EW+G +P HW V ++L +E + N ++ESN+LSLSYG II+K N GL P
Sbjct: 10 KDSGVEWLGKIPSHWSVTSLYSLASECDFPNKDMLESNLLSLSYGRIIRKDINSNDGLLP 69
Query: 278 ESYETYQIVDPGEIVFRFIDLQNDKRSLRSAQVMERGIITSAYMAVKPHGIDSTYLAWLM 337
ES+ETYQIVD G+IV R DLQND+RSLRS V ERGIITSAY A++P +YLA+L+
Sbjct: 70 ESFETYQIVDHGDIVLRLTDLQNDQRSLRSGLVKERGIITSAYTAIRPTASHYSYLAYLL 129
Query: 338 RSYDLCKVFYAMGSGLRQSLKFEDVKRLPVLVPPIKEQFDITNVINVETARIDVLVEKIE 397
R+YD K+FY+MG GLRQS+KF D++RLP+L P EQ I ++ ETA+ID L+ + E
Sbjct: 130 RAYDTLKIFYSMGGGLRQSMKFSDLRRLPILKPAYSEQSAIAVFLDHETAKIDALITEQE 189
Query: 398 QSIVLLKERRSSFIAAAVT 416
+ I LLKE+R + I+ AVT
Sbjct: 190 KLIELLKEKRQAVISHAVT 208