BLAST/PSIBLAST alignment of GI: 254780837 and GI: 145629009 at iteration 1
>gi|145629009|ref|ZP_01784808.1| putative type I site-specific restriction-modification system, S subunit [Haemophilus influenzae 22.1-21] Length = 433
>gi|145639608|ref|ZP_01795212.1| putative type I site-specific restriction-modification system, S subunit [Haemophilus influenzae PittII] Length = 433
>gi|144978512|gb|EDJ88235.1| putative type I site-specific restriction-modification system, S subunit [Haemophilus influenzae 22.1-21] Length = 433
>gi|145271399|gb|EDK11312.1| putative type I site-specific restriction-modification system, S subunit [Haemophilus influenzae PittII] Length = 433
>gi|162949226|gb|ABY21299.1| probable type I restriction-modification system specificity protein [Haemophilus influenzae] Length = 433
>gi|309750476|gb|ADO80460.1| Probable type I restriction modification system, specificity component HsdS2 [Haemophilus influenzae R2866] Length = 433
Score = 245 bits (626), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 149/432 (34%), Positives = 233/432 (53%), Gaps = 19/432 (4%)
Query: 5 KAYPQYKDSGVQWIGAIPKHWKVVPIKRFTKLNTGRTSESGKDIIYIGLEDVESGTGKYL 64
+ Y +YKDSGV+W+G IP HW+ VP++ K + + D I + L + +G +Y
Sbjct: 2 RRYERYKDSGVEWLGEIPTHWECVPLRSIFKFRNEKNNPIKTDNI-LSLS-IANGVTEYS 59
Query: 65 PKD--GNSRQSDTSTVSIFAKGQILYGKLGPYLRKAIIADFDGICSTQFLVLQPKDVLPE 122
++ GN R+ D S+ + I+ + + ++ + G S + L +
Sbjct: 60 DENRGGNKRKDDLSSYKLAYPNDIVLNSMNVIVGAVGVSKYFGAISPVYYALSLHNQRAN 119
Query: 123 L--LQGWLLSIDVTQRIEAICEGATMSHADWKGIGNIPM------------PIPPLAEQV 168
L + + + + + +G + + + I M PI PL EQ
Sbjct: 120 LSYYESIFKNENFQRGLLRFGKGILIKFGENGKMNTIRMKISQDDLKKLYFPISPLDEQQ 179
Query: 169 LIREKIIAETVRIDTLITERIRFIELLKEKKQALVSYIVTKGLNPDVKMKDSGIEWVGLV 228
I + + +T +ID + + I LLKE KQ L+ VT+GLNPDV +KDSG+EW+G V
Sbjct: 180 KIAQFLDDKTAKIDRAVELAEKQIALLKEHKQILIQNAVTRGLNPDVPLKDSGVEWIGQV 239
Query: 229 PDHWEVKPFFALVTELNRKNTKLIESNILSLSYGNIIQKLETRNMGLKPESYETYQIVDP 288
P+HWE+ + E R N + E+ +LSLSYG II K E + GL PES+ETYQIV+P
Sbjct: 240 PEHWELTIGMNVFRENKRDNKGMKENTVLSLSYGKIIIKPEEKLFGLVPESFETYQIVEP 299
Query: 289 GEIVFRFIDLQNDKRSLRSAQVMERGIITSAYMAVKP-HGIDSTYLAWLMRSYDLCKVFY 347
+I+ R DLQND+ SLR+ ++GIITSAY+ +K + + +L + + + D+ KV Y
Sbjct: 300 NDIIIRCTDLQNDQTSLRTGLAQDKGIITSAYLNLKVINNYSAKFLHYYLHALDITKVLY 359
Query: 348 AMGSGLRQSLKFEDVKRLPVLVPPIKEQFDITNVINVETARIDVLVEKIEQSIVLLKERR 407
GSGLRQ+L F D KRLP++ + EQ I + ++ +T++ID + I LKE +
Sbjct: 360 KFGSGLRQNLSFLDFKRLPIIDISLAEQQQIADYLDKQTSKIDQAIALKTAHIEKLKEYK 419
Query: 408 SSFIAAAVTGQI 419
S I VTG++
Sbjct: 420 SVLINDVVTGKV 431