RPSBLAST alignment of GI: 254780837 and SCOP domain: d1yf2a1

Alignment

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 31/211 (14%), Positives = 71/211 (33%), Gaps = 15/211 (7%)

Query: 218 KDSGIEWVGLVPDHWEVKPFFALVTELNRKNT-------KLIESNILSLSYGNIIQKLET 270
           K +    +G +P+ WE+     +  ++    T             I  +   +I    + 
Sbjct: 9   KKT---EIGEIPEDWEIVELKDVCKKIKAGGTPKTSVEEYYKNGTIPFVKIEDITNSNKY 65

Query: 271 RNMGLKPESYETYQIVDPGEIVFRFIDLQNDKRSLRSAQVMERGIITSAYMAVKPH-GID 329
                   + E     +   +    +          +A          A + + P   I 
Sbjct: 66  LTNTKIKITEEGLNNSNAWIVPKNSVLFAMYGSIGETAINKIEVATNQAILGIIPKDNIL 125

Query: 330 STYLAWLMRSYDLCKVFYAMGSGLRQSLKFEDVKRLPVLVPPIKEQFDITNVINVETARI 389
            +   + + + +            +++L  + VK   + +PP++EQ  I  ++     +I
Sbjct: 126 ESEFLYYILAKNKNYYSKLGMQTTQKNLNAQIVKSFKIPLPPLEEQKQIAKILT----KI 181

Query: 390 DVLVEKIEQSIVLLKERRSSFIAAAVTGQID 420
           D  +E IE+SI  L+  +   +   +T  I 
Sbjct: 182 DEGIEIIEKSINKLERIKKGLMHKLLTKGIG 212

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNA methylase specificity domain
superfamily: DNA methylase specificity domain
family: Type I restriction modification DNA specificity domain
domain: Bipartite methylase S protein MJ0130
species: Methanocaldococcus jannaschii [TaxId: 2190]