RPSBLAST alignment of GI: 254780837 and SCOP domain: d1yf2a2

Alignment

 Score = 58.2 bits (139), Expect = 1e-09
 Identities = 39/202 (19%), Positives = 75/202 (37%), Gaps = 15/202 (7%)

Query: 18  IGAIPKHWKVVPIKRFTKLNTGRTSESGK-------DIIYIGLEDVESGTGKYLPKDGNS 70
           IG IP+ W+V  IK   ++ TG T  + K       +I +I   D+     K        
Sbjct: 1   IGEIPEDWEVFEIKDIFEVKTGTTPSTKKSEYWENGEINWITPLDLSRLNEKIYIGSSER 60

Query: 71  RQSDTST----VSIFAKGQILYGKLGPYLRKAIIADFDGICSTQFLVLQPKDVLPELLQG 126
           + +  +     +++  KG I+     P    A++            + Q  +        
Sbjct: 61  KVTKIALEKCNLNLIPKGSIIISTRAPVGYVAVLTVESTFNQGCKGLFQKNNDSVNTEFY 120

Query: 127 WLLSIDVTQRIEAICEGATMSHADWKGIGNIPMPIPPLAEQVLIREKIIAETVRIDTLIT 186
                     +E +  G+T        + N  +P+PPL EQ    ++I      +D  I 
Sbjct: 121 AYYLKFKKNLLENLSGGSTFKELSKSMLENFKIPLPPLEEQ----KQIAKILSSVDKSIE 176

Query: 187 ERIRFIELLKEKKQALVSYIVT 208
            + +  E L+  K+ ++  ++T
Sbjct: 177 LKKQKKEKLQRMKKKIMELLLT 198

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNA methylase specificity domain
superfamily: DNA methylase specificity domain
family: Type I restriction modification DNA specificity domain
domain: Bipartite methylase S protein MJ0130
species: Methanocaldococcus jannaschii [TaxId: 2190]