RPSBLAST alignment of GI: 254780837 and SCOP domain: d1yf2a2

Alignment

 Score = 54.8 bits (130), Expect = 1e-08
 Identities = 27/209 (12%), Positives = 70/209 (33%), Gaps = 16/209 (7%)

Query: 225 VGLVPDHWEVKPFFALVTELNRKNTKLIESNILSLSYGNIIQKLETRNMG--------LK 276
           +G +P+ WEV     +            +S        N I  L+   +          +
Sbjct: 1   IGEIPEDWEVFEIKDIFEVKTGTTPSTKKSEYWENGEINWITPLDLSRLNEKIYIGSSER 60

Query: 277 PESYETYQIVDPGEIVFRFIDLQNDKRSLRSAQVMERGIITSAYMAVKPH---GIDSTYL 333
             +    +  +   I    I +         A +            +       +++ + 
Sbjct: 61  KVTKIALEKCNLNLIPKGSIIISTRAPVGYVAVLTVESTFNQGCKGLFQKNNDSVNTEFY 120

Query: 334 AWLMRSYDLCKVFYAMGSGLRQSLKFEDVKRLPVLVPPIKEQFDITNVINVETARIDVLV 393
           A+ ++         + GS   + L    ++   + +PP++EQ  I  +++     +D  +
Sbjct: 121 AYYLKFKKNLLENLSGGST-FKELSKSMLENFKIPLPPLEEQKQIAKILS----SVDKSI 175

Query: 394 EKIEQSIVLLKERRSSFIAAAVTGQIDLR 422
           E  +Q    L+  +   +   +TG++ ++
Sbjct: 176 ELKKQKKEKLQRMKKKIMELLLTGKVRVK 204

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNA methylase specificity domain
superfamily: DNA methylase specificity domain
family: Type I restriction modification DNA specificity domain
domain: Bipartite methylase S protein MJ0130
species: Methanocaldococcus jannaschii [TaxId: 2190]