HHsearch alignment for GI: 254780842 and conserved domain: COG0665
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism].
Probab=99.01 E-value=1.1e-07 Score=75.26 Aligned_cols=303 Identities=14% Similarity=0.102 Sum_probs=131.9
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCC--CCCE--EE---ECH-H---HHH--HHHHCCCHHHHHHCC
Q ss_conf 970029999790899999999997898599982885555--7836--88---878-8---999--999889947888604
Q gi|254780842|r 1 MNHFDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQ--DLRT--TM---LMG-E---GID--FLKEINVWDFLQDIA 67 (384)
Q Consensus 1 M~~~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~--~~r~--~~---l~~-~---s~~--~L~~lGl~~~l~~~~ 67 (384)
T Consensus 2 ~~~~~vvIIGgGi~Gls~A~~La~~G~~V~vie~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~ 81 (387)
T COG0665 2 SMKMDVVIIGGGIVGLSAAYYLAERGADVTVLEAGEAGGGAAGRNAGGILAPWASPGGELEVRPLADLSLALWRELSEEL 81 (387)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 97643999898699999999999769919999179887676677677775242355530334337999999999988753
Q ss_pred C------CCCCEEEEECCCCC----CC---------CCCC-CCCCHH-------CCCC-CCC-------CHHHHCCHHHH
Q ss_conf 7------12341899425765----54---------5444-345022-------2875-312-------01110000000
Q gi|254780842|r 68 E------PVSSFRLVDITDRL----IT---------APDA-IFHSSE-------IGLD-AFG-------YNIPNHVLMES 112 (384)
Q Consensus 68 ~------~~~~~~~~~~~~~~----~~---------~~~~-~~~~~~-------~~~~-~~g-------~~i~r~~L~~~ 112 (384)
T Consensus 82 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~p~~~~~~ 161 (387)
T COG0665 82 GTGAGLRRRGLLDLAAREGLKGLAQLERLAAELEAAGEDAELLDAAEAAELEPALGPDFVCGGLFDPTGGHLDPRLLTRA 161 (387)
T ss_pred CCCCCEEEECEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCEECHHHHHHH
T ss_conf 76644566242998844674325668999999986021001188878766373337764334598488834578999999
Q ss_pred HHHHHHHCCCCCC-CCEEEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCCCCCC-CCC-CCCCCCCCCEEEEEEEECC
Q ss_conf 0123664798323-420565302687178983023201211123530375432000-378-7332222430478764114
Q gi|254780842|r 113 FAEKISQDPLIHC-FDALANEIQIGEEEVTILLSTGQQIVGQFLIGSDGRNSSVRR-QMG-YGENKWSYPQKALVLNFQH 189 (384)
Q Consensus 113 L~~~~~~~~~~~~-~~~~v~~i~~~~~~v~v~~~dg~~i~adlvVgADG~~S~vR~-~l~-~~~~~~~y~~~~l~~~~~~ 189 (384)
T Consensus 162 l~~~~~~~G~~~~~~~~~v~~~~~~~~~~~v~t~~g~-~~a~~vv~a~G~~~~~l~~~~~~~~~~~~p~~~~--~~~~~~ 238 (387)
T COG0665 162 LAAAAEELGVVIIEGGTPVTSLERDGRVVGVETDGGT-IEADKVVLAAGAWAGELAATLGELPLPLRPVRGQ--ALTTEP 238 (387)
T ss_pred HHHHHHHCCCCEEECCCCEEEEEECCCEEEEEECCCE-EECCEEEECCCCCHHHHHHHCCCCCCCCEEEEEE--EEEECC
T ss_conf 9999997399189723524677614735899958970-9819899999964355554235234452467556--999637
Q ss_pred CCCCCEEE---EEECCCCCCCCCCCCCCCCEEEEEEECHH--HHHHHHHHH--HHHHHHHHHHCCCCCCCCCCCCEEE-E
Q ss_conf 78861178---87227875421000123201126750756--732455322--3467887763067546762111022-3
Q gi|254780842|r 190 SMPHNGRC---VEFHKSLGTITQIPLRENFSSLVWIMESQ--EADFYYKLP--VNEIARRLEQYLYPVIGKIEVVTDV-Q 261 (384)
Q Consensus 190 ~~~~~~~a---~~~f~~~G~~a~lP~~~~~~~ivw~~~~~--~~~~~~~~~--~~~~~~~l~~~~~~~~~~~~~~~~~-~ 261 (384)
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~p~l~-~~~~~~~w~G 317 (387)
T COG0665 239 PEGLLADGLAPVVLVVDDGGGYIRPRGDGRLRVGGTDEEGGDDPSDPEREDLVIAELLRVARALLPGLA-DAGIEAAWAG 317 (387)
T ss_pred CCCCCCCCCCCCEEEECCCCEEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC-CCCCCEEEEE
T ss_conf 763311234540254058855999888985999740233677776653100159999999998582424-5565257888
Q ss_pred EECCCCCCCHHHHHCCCCEECCCCCC------CCCHHHHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 20223343045653794210110011------3844565321121238999999852579
Q gi|254780842|r 262 IFQLSGMISHCFGKKRVVLVGEAAHA------LPPICGQGLNLSMRDVIILLNLFQSEHM 315 (384)
Q Consensus 262 ~~pl~~~~~~~~~~~rv~liGDAAH~------~~P~~GqG~n~ai~Da~~L~~~l~~~~~ 315 (384)
T Consensus 318 ~~~~t-------~pd~~P~iG~-~~~~~~~~~a~G~~~~G~~~~p~~g~~lA~~i~g~~~ 369 (387)
T COG0665 318 LRPPT-------TPDGLPVIGR-AAPLPNLYVATGHGGHGFTLAPALGRLLADLILGGEP 369 (387)
T ss_pred ECCCC-------CCCCCCEEEE-CCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCC
T ss_conf 64786-------8998878864-3898989999788772066728999999999749997