HHsearch alignment for GI: 254780842 and conserved domain: COG1251
>COG1251 NirB NAD(P)H-nitrite reductase [Energy production and conversion].
Probab=96.48 E-value=0.013 Score=38.18 Aligned_cols=62 Identities=13% Similarity=0.215 Sum_probs=38.6
Q ss_pred HHHHHHHCCCCCCCCEEEEEECCCCEEEEEECCCCCEEEEEEEEEECCCCC--CCCCCCCCCCC
Q ss_conf 012366479832342056530268717898302320121112353037543--20003787332
Q gi|254780842|r 113 FAEKISQDPLIHCFDALANEIQIGEEEVTILLSTGQQIVGQFLIGSDGRNS--SVRRQMGYGEN 174 (384)
Q Consensus 113 L~~~~~~~~~~~~~~~~v~~i~~~~~~v~v~~~dg~~i~adlvVgADG~~S--~vR~~l~~~~~ 174 (384)
T Consensus 193 L~~~le~~Gi~~~l~~~t~ei~g~~~~~~vr~~DG~~i~ad~VV~a~GIrPn~ela~~aGlavn 256 (793)
T COG1251 193 LRRKLEDLGIKVLLEKNTEEIVGEDKVEGVRFADGTEIPADLVVMAVGIRPNDELAKEAGLAVN 256 (793)
T ss_pred HHHHHHHHCCEEECCCHHHHHHCCCCEEEEEECCCCCCCCEEEEEECCCCCCCHHHHHCCCCCC
T ss_conf 9999886060453132024564576403676056873442069996230466176786176658