HHsearch alignment for GI: 254780842 and conserved domain: PRK05192
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated.
Probab=98.81 E-value=2.6e-08 Score=79.93 Aligned_cols=145 Identities=16% Similarity=0.240 Sum_probs=90.1
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCC-CCC----CCEEEECHH-HHHHHHHCCCHHHHHHCCCCCCCE-
Q ss_conf 9700299997908999999999978985999828855-557----836888788-999999889947888604712341-
Q gi|254780842|r 1 MNHFDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSF-LQD----LRTTMLMGE-GIDFLKEINVWDFLQDIAEPVSSF- 73 (384)
Q Consensus 1 M~~~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~-~~~----~r~~~l~~~-s~~~L~~lGl~~~l~~~~~~~~~~- 73 (384)
T Consensus 4 ~~~yDVIViG~GhAG~EAa~aaar~G~~t~lit~~~~~ig~msCNPsiGGi~KG~lvrEidaLg---G~mg~~aD~~~Iq 80 (621)
T PRK05192 4 PEEYDVIVVGGGHAGCEAALAAARMGAKTLLLTHNLDTIGQMSCNPAIGGIAKGHLVREIDALG---GEMGKAADKTGIQ 80 (621)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCCCHHHHHHHHHHCC---CHHHHHHHHHHHH
T ss_conf 8879889989757999999999967996799965813115860452036721657666877536---8999999887616
Q ss_pred -EEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHHCCHHHHHHHHHHHCCCCCCCCEEEEEECCCCEEEE-EECCCCCEEE
Q ss_conf -89942576554544434502228753120111000000001236647983234205653026871789-8302320121
Q gi|254780842|r 74 -RLVDITDRLITAPDAIFHSSEIGLDAFGYNIPNHVLMESFAEKISQDPLIHCFDALANEIQIGEEEVT-ILLSTGQQIV 151 (384)
Q Consensus 74 -~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r~~L~~~L~~~~~~~~~~~~~~~~v~~i~~~~~~v~-v~~~dg~~i~ 151 (384)
T Consensus 81 ~r~LN~sKGpA-------------v~~~RaQ~Dr~~Y~~~~~~~l~~~~nl~i~~~~v~~l~~~~~~v~GV~~~~g~~i~ 147 (621)
T PRK05192 81 FRMLNTSKGPA-------------VRAPRAQADRKLYRAAMREILENQPNLTLFQGEVEDLIVENDRVKGVVTQDGLEFR 147 (621)
T ss_pred HHHHCCCCCCC-------------CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCEEEEEEECCCEEEE
T ss_conf 87615888830-------------06739888599999999999964999789981457999879999999966870998
Q ss_pred EEEEEEECCC
Q ss_conf 1123530375
Q gi|254780842|r 152 GQFLIGSDGR 161 (384)
Q Consensus 152 adlvVgADG~ 161 (384)
T Consensus 148 a~~vvlttGT 157 (621)
T PRK05192 148 AKAVVLTTGT 157 (621)
T ss_pred EEEEEEECCC
T ss_conf 5269983156