HHsearch alignment for GI: 254780842 and conserved domain: PRK05945
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=98.64 E-value=5.3e-07 Score=70.31 Aligned_cols=147 Identities=20% Similarity=0.259 Sum_probs=78.5
Q ss_pred CCEEEEEEECCCHHHHHHHHHHHHCC--CEEEEEECCCCCCCCCEEEECHHHHHH-HHHCCCH-----------------
Q ss_conf 97002999979089999999999789--859998288555578368887889999-9988994-----------------
Q gi|254780842|r 1 MNHFDVIIIGSGLAGSVAAIGAAKKG--FLTALVSPRSFLQDLRTTMLMGEGIDF-LKEINVW----------------- 60 (384)
Q Consensus 1 M~~~DV~IvGaG~aGl~lA~~L~~~g--~~v~iiE~~~~~~~~r~~~l~~~s~~~-L~~lGl~----------------- 60 (384)
T Consensus 1 ~~e~DVLVIGsG~AGl~AA~~a~~~~~~~~V~lv~K~~~~~~~s--~~a~gGi~a~~~~~~~~Ds~e~~~~Dt~k~g~~l 78 (575)
T PRK05945 1 MLEHDVVIVGGGLAGCRAALEIARLDPSLDVAVVAKTHPIRSHS--VAAQGGIAASLKNVDPQDSWEAHAFDTVKGSDYL 78 (575)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCH--HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCC
T ss_conf 94089899996599999999999878998299997889999726--8887889988437999989999999999864688
Q ss_pred -----------------HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHH---------CCHHHHHH
Q ss_conf -----------------7888604712341899425765545444345022287531201110---------00000001
Q gi|254780842|r 61 -----------------DFLQDIAEPVSSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPN---------HVLMESFA 114 (384)
Q Consensus 61 -----------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r---------~~L~~~L~ 114 (384)
T Consensus 79 ~d~~lv~~l~~~~~~~v~~Le~~Gv~f~r~-----~dG~~~-------~~~~----gGhs~~R~~~~~~~tG~~i~~~L~ 142 (575)
T PRK05945 79 ADQDAVAILTQEAPDVIIDLEHLGVLFSRL-----PDGRIA-------QRAF----GGHSHNRTCYAADKTGHAILHELV 142 (575)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCCCCC-----CCCCCC-------CEEC----CCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 889999999999999999999869977608-----898880-------1103----671025554568883999999999
Q ss_pred HHHHHCCCCCCCCEEEEEECCCCEEEE----EECCCCC--EEEEEEEEEECCCCCCC
Q ss_conf 236647983234205653026871789----8302320--12111235303754320
Q gi|254780842|r 115 EKISQDPLIHCFDALANEIQIGEEEVT----ILLSTGQ--QIVGQFLIGSDGRNSSV 165 (384)
Q Consensus 115 ~~~~~~~~~~~~~~~v~~i~~~~~~v~----v~~~dg~--~i~adlvVgADG~~S~v 165 (384)
T Consensus 143 ~~~~~~gv~i~~~~~v~~Ll~~dg~v~Ga~~~~~~~G~~~~i~AkaVVlATGG~~~~ 199 (575)
T PRK05945 143 NNLRRYGVTIYDEWYVMRLILEENEAKGVVMYHIADGRLEVVRAKAVMFATGGYGRV 199 (575)
T ss_pred HHHHHCCCEEEEEEEEEEEEEECCEEEEEEEEECCCCCEEEEECCEEEECCCCCCCC
T ss_conf 998546978994178888987099789999997168838999899899899998778