HHsearch alignment for GI: 254780842 and conserved domain: PRK06069

>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=98.59  E-value=1.6e-06  Score=66.87  Aligned_cols=149  Identities=25%  Similarity=0.339  Sum_probs=76.0

Q ss_pred             CC--EEEEEEECCCHHHHHHHHHHHHC---CCEEEEEECCCCCCCCC-----EE--EECH----HHHH-----HHHHC-C
Q ss_conf             97--00299997908999999999978---98599982885555783-----68--8878----8999-----99988-9
Q gi|254780842|r    1 MN--HFDVIIIGSGLAGSVAAIGAAKK---GFLTALVSPRSFLQDLR-----TT--MLMG----EGID-----FLKEI-N   58 (384)
Q Consensus         1 M~--~~DV~IvGaG~aGl~lA~~L~~~---g~~v~iiE~~~~~~~~r-----~~--~l~~----~s~~-----~L~~l-G   58 (384)
T Consensus         1 ~~~~~~DVlVIG~G~AGl~AA~~a~~~~~~~~~V~lv~K~~~~~s~s~~a~gG~~a~~~~~~~~Ds~~~~~~Dt~~~g~~   80 (582)
T PRK06069          1 MEVLKYDVVIVGSGLAGLRAAVAAARASGGKISIAVVSKTQAMRSHSVSAEGGTAAVLYPEKTGDSPELHAYDTVKGSDF   80 (582)
T ss_pred             CCEEECCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             97787068999973999999999998538998699997989999708999877998717888999989999999985368


Q ss_pred             CH----------------HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHH---------CCHHHHH
Q ss_conf             94----------------7888604712341899425765545444345022287531201110---------0000000
Q gi|254780842|r   59 VW----------------DFLQDIAEPVSSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPN---------HVLMESF  113 (384)
Q Consensus        59 l~----------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r---------~~L~~~L  113 (384)
T Consensus        81 l~d~~lv~~l~~~a~~~v~~le~~Gv~f~r~-----~~G-------~~~~~~~g----Ghs~~R~~~~~d~tG~~i~~~l  144 (582)
T PRK06069         81 LADQDAVEVLVREAPEEIRFLDHWGVPWSRD-----PDG-------RISQRPFG----GMSFPRTTFAADKTGFYIMSTL  144 (582)
T ss_pred             CCCHHHHHHHHHHHHHHHHHHHHCCCCCEEC-----CCC-------CEEEEECC----CCCCCEEECCCCCCCHHHHHHH
T ss_conf             8889999999998999999999769971068-----999-------88752158----7034500036787539999999


Q ss_pred             HHHHHHCCCCCCCC-EEEEEECCCCEEE---E-EECCCCC--EEEEEEEEEECCCCCCC
Q ss_conf             12366479832342-0565302687178---9-8302320--12111235303754320
Q gi|254780842|r  114 AEKISQDPLIHCFD-ALANEIQIGEEEV---T-ILLSTGQ--QIVGQFLIGSDGRNSSV  165 (384)
Q Consensus       114 ~~~~~~~~~~~~~~-~~v~~i~~~~~~v---~-v~~~dg~--~i~adlvVgADG~~S~v  165 (384)
T Consensus       145 ~~~~~~~~gv~~~~~~~vt~Ll~~~g~v~Ga~~~d~~~G~~~~i~AkaVVlATGG~g~l  203 (582)
T PRK06069        145 YSRALRFDNIHFYHEHFVTSLIVENGVFKGVTAIDLRRGEFKVFQAKAGIIATGGAGRL  203 (582)
T ss_pred             HHHHHHCCCCEEEEEEEEEEEEECCCEEEEEEEEECCCCEEEEEEECEEEECCCCCCCC
T ss_conf             99998469948997789888874399899999997689829999825599898867546