HHsearch alignment for GI: 254780842 and conserved domain: PRK06452

>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=98.63  E-value=6.6e-07  Score=69.62  Aligned_cols=157  Identities=17%  Similarity=0.186  Sum_probs=78.2

Q ss_pred             CC--EEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC-----CCEE--EEC----H-HHHHH-----HHH-CCCH
Q ss_conf             97--00299997908999999999978985999828855557-----8368--887----8-89999-----998-8994
Q gi|254780842|r    1 MN--HFDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQD-----LRTT--MLM----G-EGIDF-----LKE-INVW   60 (384)
Q Consensus         1 M~--~~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~~-----~r~~--~l~----~-~s~~~-----L~~-lGl~   60 (384)
T Consensus         1 ~~~~~~DVlVIG~G~AGl~AAi~a~~~G~~V~lv~K~~~~~s~s~~a~ggi~a~~~~~~~~~Ds~~~~~~Dt~~~G~~l~   80 (566)
T PRK06452          1 MEKLSYDAVIIGAGLAGLMAAHEIASAGYSVAVISKVFPTRSHSAAAEGGIAAYIPGNSDPNDNPDYMTYDTIKGGDYLV   80 (566)
T ss_pred             CCEEECCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf             96687078999974999999999987799789997889999753686682068635799999899999999998546888


Q ss_pred             ----------------HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHH--HCCHHHHHHHHHHHCCC
Q ss_conf             ----------------788860471234189942576554544434502228753120111--00000000123664798
Q gi|254780842|r   61 ----------------DFLQDIAEPVSSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIP--NHVLMESFAEKISQDPL  122 (384)
Q Consensus        61 ----------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~--r~~L~~~L~~~~~~~~~  122 (384)
T Consensus        81 d~~~v~~l~~~~~~~i~~L~~~Gv~f~r~-----~dG~~~---~~~~-gghs~~R~~~~~d~tG~~i~~~l~~~~~~~~i  151 (566)
T PRK06452         81 DQDAAELLSYKSGEIVELLERWGALFNRQ-----PDGRVA---LRYF-GGQTYPRTRFVGDKTGMALLHTLYERTSGLNV  151 (566)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHCCCCCCCC-----CCCCEE---EEEC-CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf             99999999998999999999839986528-----999884---4334-77551335742887668999999999862997


Q ss_pred             CCCCCEEEEEECCCCEEEE----EECCCCC--EEEEEEEEEECCCCCCCC
Q ss_conf             3234205653026871789----8302320--121112353037543200
Q gi|254780842|r  123 IHCFDALANEIQIGEEEVT----ILLSTGQ--QIVGQFLIGSDGRNSSVR  166 (384)
Q Consensus       123 ~~~~~~~v~~i~~~~~~v~----v~~~dg~--~i~adlvVgADG~~S~vR  166 (384)
T Consensus       152 ~~~~~~~~~~Ll~~~~~v~Gav~~d~~~~~~~~~~AkaVVLATGG~g~ly  201 (566)
T PRK06452        152 DFYNEWFAWDLVRDEKRVAGVVAMDMRSMEPFFFKAKAVVIASGGMGMLY  201 (566)
T ss_pred             EEEEEEEEEEEEECCCEEEEEEEEECCCCEEEEEECCEEEEECCCCCEEE
T ss_conf             89987899998853986889999976899599998188999178513443