HHsearch alignment for GI: 254780842 and conserved domain: PRK06452
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=98.63 E-value=6.6e-07 Score=69.62 Aligned_cols=157 Identities=17% Similarity=0.186 Sum_probs=78.2
Q ss_pred CC--EEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCC-----CCEE--EEC----H-HHHHH-----HHH-CCCH
Q ss_conf 97--00299997908999999999978985999828855557-----8368--887----8-89999-----998-8994
Q gi|254780842|r 1 MN--HFDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQD-----LRTT--MLM----G-EGIDF-----LKE-INVW 60 (384)
Q Consensus 1 M~--~~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~~-----~r~~--~l~----~-~s~~~-----L~~-lGl~ 60 (384)
T Consensus 1 ~~~~~~DVlVIG~G~AGl~AAi~a~~~G~~V~lv~K~~~~~s~s~~a~ggi~a~~~~~~~~~Ds~~~~~~Dt~~~G~~l~ 80 (566)
T PRK06452 1 MEKLSYDAVIIGAGLAGLMAAHEIASAGYSVAVISKVFPTRSHSAAAEGGIAAYIPGNSDPNDNPDYMTYDTIKGGDYLV 80 (566)
T ss_pred CCEEECCEEEECCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCC
T ss_conf 96687078999974999999999987799789997889999753686682068635799999899999999998546888
Q ss_pred ----------------HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHH--HCCHHHHHHHHHHHCCC
Q ss_conf ----------------788860471234189942576554544434502228753120111--00000000123664798
Q gi|254780842|r 61 ----------------DFLQDIAEPVSSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIP--NHVLMESFAEKISQDPL 122 (384)
Q Consensus 61 ----------------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~--r~~L~~~L~~~~~~~~~ 122 (384)
T Consensus 81 d~~~v~~l~~~~~~~i~~L~~~Gv~f~r~-----~dG~~~---~~~~-gghs~~R~~~~~d~tG~~i~~~l~~~~~~~~i 151 (566)
T PRK06452 81 DQDAAELLSYKSGEIVELLERWGALFNRQ-----PDGRVA---LRYF-GGQTYPRTRFVGDKTGMALLHTLYERTSGLNV 151 (566)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCCC-----CCCCEE---EEEC-CCCCCCEEEECCCCCCHHHHHHHHHHHHCCCC
T ss_conf 99999999998999999999839986528-----999884---4334-77551335742887668999999999862997
Q ss_pred CCCCCEEEEEECCCCEEEE----EECCCCC--EEEEEEEEEECCCCCCCC
Q ss_conf 3234205653026871789----8302320--121112353037543200
Q gi|254780842|r 123 IHCFDALANEIQIGEEEVT----ILLSTGQ--QIVGQFLIGSDGRNSSVR 166 (384)
Q Consensus 123 ~~~~~~~v~~i~~~~~~v~----v~~~dg~--~i~adlvVgADG~~S~vR 166 (384)
T Consensus 152 ~~~~~~~~~~Ll~~~~~v~Gav~~d~~~~~~~~~~AkaVVLATGG~g~ly 201 (566)
T PRK06452 152 DFYNEWFAWDLVRDEKRVAGVVAMDMRSMEPFFFKAKAVVIASGGMGMLY 201 (566)
T ss_pred EEEEEEEEEEEEECCCEEEEEEEEECCCCEEEEEECCEEEEECCCCCEEE
T ss_conf 89987899998853986889999976899599998188999178513443