HHsearch alignment for GI: 254780842 and conserved domain: PRK09078
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed.
Probab=98.65 E-value=6.7e-07 Score=69.58 Aligned_cols=155 Identities=17% Similarity=0.224 Sum_probs=77.6
Q ss_pred EEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC-----CEE--EE---CHHHHH--HHHHC------CCH----
Q ss_conf 002999979089999999999789859998288555578-----368--88---788999--99988------994----
Q gi|254780842|r 3 HFDVIIIGSGLAGSVAAIGAAKKGFLTALVSPRSFLQDL-----RTT--ML---MGEGID--FLKEI------NVW---- 60 (384)
Q Consensus 3 ~~DV~IvGaG~aGl~lA~~L~~~g~~v~iiE~~~~~~~~-----r~~--~l---~~~s~~--~L~~l------Gl~---- 60 (384)
T Consensus 12 e~DVlVIGsG~AGL~AAi~a~~~G~~V~li~K~~~~~s~s~~AqGGi~aa~~~~~~Ds~~~h~~DTl~aG~~l~d~~~v~ 91 (598)
T PRK09078 12 KYDVVVVGAGGAGLRATLGMAEAGLRTACITKVFPTRSHTVAAQGGISASLGNMGEDDWRWHMYDTVKGSDWLGDQDAIE 91 (598)
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHCCCCCHHHHH
T ss_conf 37989999569999999999874990799978899998546541005033378999998999999998635768899999
Q ss_pred ----------HHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCHHCCCCCCCCHHHH---------CCHHHHHHHHHHHCC
Q ss_conf ----------7888604712341899425765545444345022287531201110---------000000012366479
Q gi|254780842|r 61 ----------DFLQDIAEPVSSFRLVDITDRLITAPDAIFHSSEIGLDAFGYNIPN---------HVLMESFAEKISQDP 121 (384)
Q Consensus 61 ----------~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~r---------~~L~~~L~~~~~~~~ 121 (384)
T Consensus 92 ~l~~~a~~~i~~L~~~Gv~f~r~----~dG~~~~~~~-GGhs~~~~~---~~~~~R~~~~~d~tG~~i~~~L~~~~~~~~ 163 (598)
T PRK09078 92 YMCREAPAAVYELEHYGVPFSRT----EEGKIYQRPF-GGMTTNYGE---GPPAQRTCAAADRTGHAILHTLYQQSLKHN 163 (598)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCC----CCCCCCCCCC-CCEEECCCC---CCCEEEEEEECCCCHHHHHHHHHHHHHHCC
T ss_conf 99998999999999859924328----9988612445-643201357---875047885067609999999999998639
Q ss_pred CCCCCCEEEEEECCCCEE----EE-EECCCCC--EEEEEEEEEECCCCCCC
Q ss_conf 832342056530268717----89-8302320--12111235303754320
Q gi|254780842|r 122 LIHCFDALANEIQIGEEE----VT-ILLSTGQ--QIVGQFLIGSDGRNSSV 165 (384)
Q Consensus 122 ~~~~~~~~v~~i~~~~~~----v~-v~~~dg~--~i~adlvVgADG~~S~v 165 (384)
T Consensus 164 i~~~~~~~~~~li~~~~G~v~Gv~~~~~~~G~~~~i~AkaVILATGG~g~~ 214 (598)
T PRK09078 164 AEFFIEYFALDLIMDDEGVCRGVVAWNLDDGTLHRFRAHMVVLATGGYGRA 214 (598)
T ss_pred CEEEEEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEECEEEECCCCCCCC
T ss_conf 879998899999982798599999998789958999707699887877766